Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00271 ATGGTCCTTTTCCCATCTTTTGTGAATGGATTGGTAAGAACTGTGTCAATCAAGAAAGAGAAGAATTGTCAAAAGGAGGATGGAAGAAAAGCTGTGGAAGAATTGGCAAAGGAAGCAAGGAAGAATGAATTGCTATTGAGTTCATCTGGAGTTGTGAAGTCAACCAAGGCCAACAATTTTGTTTCTGTGTTCACTAATAGGGGCCAGAAAGGAGTCAATCAGGATCGTCTTCTTGTTTGGGAGGAATTTGGTTGCCAACAAGACATGATGTTCTGTGGAGTTTTTGATGGGCATGGTCCATGGGGACACTTTGTAGCCAAAAGGGTTAGGAAGTTAGTACCAGCCGTTTTGCTATGCAATTGGCAGGAAAATCTGGCTGCAACATCACTTGACCTGGATTTTAAAATGGAAGCTGACAAAAATATCCATGGATTGGACATATGGAAACAATCTTACATAAAGACTTGTGCTGCCGTTGATCAGGATCTGAAGCAGCACACTGGGATTGATTCCTTCCTAAGTGGCTCTACAGCATTGACAATTATCAAACAGggtgaatatcttactatagcaaacataggtgattgtagggctgtcttggcaactacttcagatgatggcatattaactccacatcagcttaccactgacttcaagccaaATTTACCTCaggaggcagaacgcataacacaatccagagggagggtattttgtatggaagatgaaccaggagtgtacagggtctggatgccaaatggtaaaacaccaggactagcaatatctagagcttttgGAGACCACTGCATGAAGGACTTTGGACTAATCTCCGTGCCTGATGTCACACACAGAAAAATTACCACCAGGGATCAATTTGTCATCTTGGCAACAGATGGGGTATGGGATGTTATATCCAACCAGGAAGCAGTGAAGATTGTTTCAGCAACGTCACATAAAGAAAAAGCTGCTCAAAGGCTTGTGAAATGTGCCATACATGAATGGAAACGGAAAAAAAGTGGCATTGCGATGGATGATATGTCAGCTATTTGCCTCTTCTTTCACTCTTCCCCCTCTCATCAACTCCCCCCAGCCATCAAAATTGTTGATTAA 1107 0.3333 MVLFPSFVNGLVRTVSIKKEKNCQKEDGRKAVEELAKEARKNELLLSSSGVVKSTKANNFVSVFTNRGQKGVNQDRLLVWEEFGCQQDMMFCGVFDGHGPWGHFVAKRVRKLVPAVLLCNWQENLAATSLDLDFKMEADKNIHGLDIWKQSYIKTCAAVDQDLKQHTGIDSFLSGSTALTIIKQGEYLTIANIGDCRAVLATTSDDGILTPHQLTTDFKPNLPQEAERITQSRGRVFCMEDEPGVYRVWMPNGKTPGLAISRAFGDHCMKDFGLISVPDVTHRKITTRDQFVILATDGVWDVISNQEAVKIVSATSHKEKAAQRLVKCAIHEWKRKKSGIAMDDMSAICLFFHSSPSHQLPPAIKIVD 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00271 368 Pfam Protein phosphatase 2C 84 331 IPR001932 -
Gma17g00271 368 Gene3D - 46 354 IPR036457 -
Gma17g00271 368 CDD PP2Cc 59 352 IPR001932 -
Gma17g00271 368 PANTHER ALPHABET, ISOFORM E-RELATED 1 364 - -
Gma17g00271 368 SUPERFAMILY PP2C-like 54 354 IPR036457 -
Gma17g00271 368 SMART PP2C_4 51 350 IPR001932 -
Gma17g00271 368 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 364 - -
Gma17g00271 368 Coils Coil 18 38 - -
Gma17g00271 368 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00271 Gma-Chr17 2189250 2192745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00271 1 353 PP2C-type Phosphatase Gene Family AT3G05640 60.000 7.70e-164 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00271 - - gmx:100814087 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00271 17 2189250 2192745 Gma17g00271 17 2189250 2192745 ECH