Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00265 ATGAAGAATGGACTCGACACCACCCATGAGAAGAAGAAGAGGAAGCTCGCCATTCTGAGCGTGTCTTCCCTCCTCCTGGTGGCGATGGTGGTCGCGGCGGCCGTCGGCATAAGAGAAGGCGCCGATGTGGTCGAGGAAGGCGGCGACTCGATCGTGAAATCTCAAAGGAACGTGCAAGTGATATGCGAATCCGCGGAATACAAAGAAACATGCCACAAGAGTCTCGCCAAAGCTTCCGAAACTTCCGATCTGAAGGAGCTCATCATAACCGCGTTCAACGCCACGGCCGAAGAGATCGCAAAGCAAATAAAAAACTCGACGCTCTACCACGAACTTGCCACCGACGACATGAACAAACAGGCCATGGACATCTGCAAGGAAGTTCTAGGTTACGCTGTCGATGACATGCACCAATCCGTTCGCAAGTTGGAAGAGTTTGAACTAAACAAGTTGAACGATTACGCCTATGatctcaaggtctggatcgccggtactctcgctcaccaacagacatgtttggatgggttcgagaacacgaccaacgaggctggcaagaCCATGGCTAGGGTTCTCAACACTTCTTTGGAGCTCAGCAACAACGCATTGGACATAGTGAACGGTGTATCGAATCTCTTCAAGGGTCTTAACTTGAGTTCCTTCAGCAACAACAACAACAGGAAGCTTCTATCGGAGGTAGATGGGTTCCCTACGTGGGTGAGTGAAGGACAGAGGAGGCTTCTTCAGGCTGCGGACGCCAAAGCGGacgttgttgtggctcaggatgggagtggacaggacaccctctacacacaatcccagcgtcagttctaccgcgactgcaccgtcacgggcaccatcgacttcgtgttcggcgacgccgtggccgtgttccagaactgcaagttcatcgtaaggaagcccatggagaaccagcaatgcatggtcaccgccggtggaaggaccaagatcgacagccccagtgcactggtcttccagagctgcatcttcaccggcgaacccgacgtgtttgccttgtcccccaagattgcttacttgggaaggccgtggagggtttacgctaaggttgtcatcatggactcgcaaatcgatgacatctttgtccctgaagggtacatgccgtggATGGGAAGTGCTTTCAAGGACACAAGCACCTACTACGAGTTCAACAACAGGGGTTTTGGTGCTAACACTCAAGGTAGAATCACGTGGCCTGGTTTTAAGGTTATCACTCCCATTGAAGCTACTGATTACTACCCAGGAAAATTCTTTGAGATCGCTAATTCGACTGAGCGTGATTCTTGGATCGTTGGGTCTGGGGTGCCCTACTCCCTTGGCCCAATTATTGCGCTGCCTTTGCCAACAGCTTAA 1389 0.3333 MKNGLDTTHEKKKRKLAILSVSSLLLVAMVVAAAVGIREGADVVEEGGDSIVKSQRNVQVICESAEYKETCHKSLAKASETSDLKELIITAFNATAEEIAKQIKNSTLYHELATDDMNKQAMDICKEVLGYAVDDMHQSVRKLEEFELNKLNDYAYDLKVWIAGTLAHQQTCLDGFENTTNEAGKTMARVLNTSLELSNNALDIVNGVSNLFKGLNLSSFSNNNNRKLLSEVDGFPTWVSEGQRRLLQAADAKADVVVAQDGSGQDTLYTQSQRQFYRDCTVTGTIDFVFGDAVAVFQNCKFIVRKPMENQQCMVTAGGRTKIDSPSALVFQSCIFTGEPDVFALSPKIAYLGRPWRVYAKVVIMDSQIDDIFVPEGYMPWMGSAFKDTSTYYEFNNRGFGANTQGRITWPGFKVITPIEATDYYPGKFFEIANSTERDSWIVGSGVPYSLGPIIALPLPTA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00265 462 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 209 IPR035513 -
Gma17g00265 462 PANTHER PECTINESTERASE 8 265 - -
Gma17g00265 462 PANTHER PECTINESTERASE 265 456 - -
Gma17g00265 462 CDD PMEI-like_3 61 210 - -
Gma17g00265 462 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 207 IPR035513 -
Gma17g00265 462 Gene3D - 214 454 IPR012334 -
Gma17g00265 462 Pfam Pectinesterase 264 430 IPR000070 GO:0030599|GO:0042545
Gma17g00265 462 Pfam Plant invertase/pectin methylesterase inhibitor 58 204 IPR006501 GO:0004857
Gma17g00265 462 SUPERFAMILY Pectin lyase-like 264 430 IPR011050 -
Gma17g00265 462 SMART PMEI_2 53 204 IPR006501 GO:0004857
Gma17g00265 462 TIGRFAM PME_inhib: pectinesterase inhibitor domain 53 207 IPR006501 GO:0004857
Gma17g00265 462 ProSitePatterns Pectinesterase signature 2. 282 291 IPR033131 -
Gma17g00265 462 PANTHER PECTINESTERASE 8 265 - -
Gma17g00265 462 PANTHER PECTINESTERASE 265 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00265 Gma-Chr17 2157712 2160167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00265 265 458 Carbohydrate Esterase AT3G05610 45.128 1.99e-55 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00265 K01051 - gmx:100800194 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00265 17 2157712 2160167 Gma09g00387 09 3632105 3642990 PCT
Gma09g00387 09 3632105 3642990 Gma17g00265 17 2157712 2160167 PCT