Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00240 ATGCTTAATTCTGAAGGAGAACTTAAAATAAGTTTTGGCTATAAATGCAATAGAGATAGAGGTATTCCTTGTGAAGTTGTCAGTGGCTGCAAAATCCTTCCTGGAGTATGTAGAACAAGCAGTTTCTCCTGCTTGTCAGGTGCAGCCTTAAGTGCAAATGCTACATTAGCAAACACAAACATCTGCAATGGTAAGATAGGAGAAGAAATCCTTCCAAGTTGGGACTCTCCTACTTCATTTCGAAAGGTAACCTCTTCGCCAAGTCTTTCAAAGTTGGACATACTATCATCCTCCCCCCCGAATAGTTTGTCTTACCTTAGCTGCAGTCCTTCTACTGTAAGTGATATCCTTGAATATGACTCTTGCACATTAAAATCCATGAGTGATCCTTCCAGAAGTGAAGGTTTTCTTAATGCTAAGGAAGTTCAGGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTATTCTGTGCAATATATGACGGCTTTAATGGAAGAGATGCAGCTGACTTTCTGGCTGGTACCCTGTATGAAACCATCATATCTTACTTTAATAAGTTAATTTGGGAATTGGAGCCGGGTTCCATCAAAGCTTATGATAAAGGATGCTTGGGTGGATCCCTGCAATATAAGTTGGATGATAGTCTTATTTATCACGAGAATCAATCTCTGTCGAGATTTAAGGGAATAAACAATTCTAATCATGGTTGTTTTGCAAAGTGTAATCCTTCTACTAAGTCAGAAGTATCATGTGATTCATTTTCACATGGGGTACTTGATATCCTTCAACGTGCCATTAGTCAGGCTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGTCCTGATTTAGTTTCTATTGGATCTTGTGTTTTACTTGTGCTTCTTCACGGTAATGATTTGTATACACTTAATCTAGGTGACAGCAGAGCAGTATTGGCAACATGCGGTACAGCTGATCGGATGGATAAGAGTGAGAGACTCAAGGCTATACAGCTTACAGATAATCATACTGTTGATAATAAAGTTGAAAGAGCTAGACTTCTGGCTGATCATCCTGATGATCCCAAGATTGTTATAGCAGGAAAGGTGAAAGGTAAATTGAAGGTTACTCGCGCTTTTGGAGTTGGCTACTTGAAAAAGAAAAGTCTGAATGATGCTTTGATGGGAATCCTTCGAGTTCACGATCTTAAAAGCCCACCATACATATCCACTAACCCATCATTGAATGTCCATAGAATCTCAAATTCCGATCAATTTGTTATAGTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAGGCAGTAAAGCTTGTGGAGTCTTATATCTTGAACAATCCTTTTGGTGATCCAGCAAAGTTTCTCATAGAACAGCTTGTAGCTAGAGCAGCTGATTCTGCCGGTCTGAGCATGGAAGAGTTGATGAATATTCCAGCTGGAAGGAGAAGGAAGTACCATGACGACGTGACCGTAATTGTAATCATGCTAGGGATGAATCAGAGGACTTCAAAGGCATCAACTTGCATTTAA 1575 0.4006 MLNSEGELKISFGYKCNRDRGIPCEVVSGCKILPGVCRTSSFSCLSGAALSANATLANTNICNGKIGEEILPSWDSPTSFRKVTSSPSLSKLDILSSSPPNSLSYLSCSPSTVSDILEYDSCTLKSMSDPSRSEGFLNAKEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYETIISYFNKLIWELEPGSIKAYDKGCLGGSLQYKLDDSLIYHENQSLSRFKGINNSNHGCFAKCNPSTKSEVSCDSFSHGVLDILQRAISQAENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSRAVLATCGTADRMDKSERLKAIQLTDNHTVDNKVERARLLADHPDDPKIVIAGKVKGKLKVTRAFGVGYLKKKSLNDALMGILRVHDLKSPPYISTNPSLNVHRISNSDQFVIVGSDGLFDFFSNDEAVKLVESYILNNPFGDPAKFLIEQLVARAADSAGLSMEELMNIPAGRRRKYHDDVTVIVIMLGMNQRTSKASTCI 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00240 524 SUPERFAMILY PP2C-like 150 512 IPR036457 -
Gma17g00240 524 Pfam Protein phosphatase 2C 275 466 IPR001932 -
Gma17g00240 524 SMART PP2C_4 127 509 IPR001932 -
Gma17g00240 524 Gene3D - 105 520 IPR036457 -
Gma17g00240 524 PANTHER PROTEIN PHOSPHATASE 2C 2 523 IPR015655 GO:0004722|GO:0006470
Gma17g00240 524 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 523 - -
Gma17g00240 524 CDD PP2Cc 149 509 IPR001932 -
Gma17g00240 524 ProSiteProfiles PPM-type phosphatase domain profile. 136 511 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00240 Gma-Chr17 1951880 1953995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00240 6 524 PP2C-type Phosphatase Gene Family AT3G16560 62.095 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00240 - - gmx:102666789 1026.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00240 17 1951880 1953995 Gma09g00418 09 3926589 3930416 PCT
Gma09g00418 09 3926589 3930416 Gma17g00240 17 1951880 1953995 PCT