Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00215 ATGAATGAGGGTTATCGTCCCAAGTTGTCAGACTTTAGGACAACAATTTATCCTGATTGTGAAGTATACAACGAAGTGGGAACCTTTAGTTATATGGATCCCAACTATGTCAATATTGGCCTAGTAACGTTCAGTAGTGATGTCTACAGTTTTGGAATGGCATTGCTGGAACTTCTCACGGGGCATAAGGTTAATGATAGCAAGCGTGAAGGAGGGCAACAAAATCTTATTTTGTGGACTCTGCATCTCCACATTTTTAAGAAAGGGTTCTTAAGAAGAGGTCGTGCCTAA 291 0.4055 MNEGYRPKLSDFRTTIYPDCEVYNEVGTFSYMDPNYVNIGLVTFSSDVYSFGMALLELLTGHKVNDSKREGGQQNLILWTLHLHIFKKGFLRRGRA 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00215 96 Gene3D Transferase(Phosphotransferase) domain 1 1 91 - -
Gma17g00215 96 ProSiteProfiles Protein kinase domain profile. 1 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00215 96 PANTHER OS01G0750732 PROTEIN 5 83 - -
Gma17g00215 96 SUPERFAMILY Protein kinase-like (PK-like) 2 82 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00215 Gma-Chr17 1754875 1755258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00215 26 80 Receptor kinase-like Gene Family AT4G02010 50.909 1.43e-13 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma17g00215 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00215 - K13430 tcc:18590818 78.5666