Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00198 ATGGTGTCTGTCTCTCTCTCTCACTTTCAGAACCGAGAAGTCATAGCCGGTTCGTTTAGTTTCCTCTCCCTCCCTTCCTTCCTTCTTCCCAAAATTCTAAAGATTCACATACAGCAAGGGGTGGTCACGTACAATTTGGTGAATCTGAAATCGACTTCTGTATACCGATTGGGGGACTGGTGGGATGTTGGATTAAATGTAGCTTCACTTGGCCATAGCATCCACTATAATATTTTCCCATCTGGATCTTTGATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGACATTGCTGAAAAGAAGATGGAAAACAGGGATTTTGTTGGGGCTCGCAAAATTGCTCTAAAGGCTCAGCAGCTGTACCCTGATCTGGAAAATATAGCTCAAATGCTTGTTGTTTGTGATGTGCACTGCTCTGCTGAGCAGAAATTGTATGGTAATGAGATGGATTGGTATGAAATTCTTCAGGTCGAACAGACAGCTGGTGATGCAATAATTAAGAAGCAATATAGGAAGTTTGCTCTCCAACTTCATCCTGACAAAAACAACTTTGCTGGTGCAGAAGCTGCATTTAAGTTGATTGGGGAAGCTCAAAGAGTGCTTTTGGACAGAGAAAAACGTTCTCTCTTTGACATGAAGCTTAGAGTTCCAATGAACAAACCTGCTATGTCACGTTTTGATTCTACAGTGAGGAACAATGTAAGATCCCACTCTACAAGCTCAAATGCTCGGCAGCAACAGCAGCAATCTAGGCAGCCAGCACAGCAGCAGCAGCAAAATGGTGACCGCCCTACTTTTTGGACGGTCTGCCCATTTTGTTCTGTTAGGTATCAATATTACAAAGAAATTTTAAATAAATCTCTTTGCTGTCAAAATTGCAAAAGGCCCTTTTTTGCATATGAAGTGAATGTACAAAGTACATCATCACCAGCATCTAATTCAACTCAGCAAGCTTCTGACCAGCAGAAAGATGGTTTGAATCATGGTACTTTCAAGATGGGTGCTGGATCTCATGGCAATTCACAGGCTGAGAAGTCCAATATGGGGCCTTATGATAAAAAAAGACCTAGTAATGTCTCTGGAAAACCATATGGAAAGAGGAAGAGGAAGCAGGTGGCTGAATCCAGTGAAGGTTCTGATTCTATGAGAACCAATGATTCTGAAGAAGATATAGTTGCCGGCAAGGATGGTAATTCTGGAGTAGAAAACCATTCAACTTCAAGAGAAGGGCTTCCACGCAGATCTACACGGCAAAAGCATCAAGTTTCCTACAAGGAGAATGTGAAAAACAGTGATAATGGCTTCTTGAAACCACGTGGTGATGGTGAAAGTCATGGTGAGACAACTAAAATAAATGATCAGAATGGTTTAGCTCCTGAACTTAAAGAAGTAAAACAGAAACAACACTTGTATTCTGAAAGAAATGAGGAAACTAAGACAGATAAGGGAAAAGATGCAGTGGGAGGGTCAACACAGATGGATGGAACTTCAGAGCATTCCCCAGATTCAACCTCCAAAGCAGAAAATCATCCAAATGTTTATGTCTATCCTGATGCAGAGTTCAGTGATTTTGACAAGGGCAAGAATAAAGAATGTTTTACTGCTGGGCAGATATGGGCTATTTATGATACATCAGAAGGCATGCCTAGATTCTACGCTTTAATCAGAAAAGTTCTGTCTCCTGGATTCAGGCTGCAGATAATATGGTTTGAACCACATCCAGATTGCAAGGATGAAATCAACTGGGTAAATGAGGAAATGCCTGTTGCTTGTGGGAAATATAAACTTAGTGACATTGACATCACTGAAGATCATCTAATGTTCTCTCATCCCGTTTTGTGTGAAAAAATTAGCCGTAATACTTTTAAAGTGTATCCTAGAAAAGGAGAAACTTGGGCCCTTTTTAAAAATTGGGATATTAAATGGTACATGGATGTGAAATCTCATCAGCTGTATGAATATGAGATTGTTGAAATCTTGACAGATTATGTTGAAGGTGAGGGTGTATATGTTGCATACATGGCTAAGTTGAAAGGTTTTGTAAGTCTCTTCCTTCGAAATATTAATGAAGAAAATAAATCATTTCAAATTCCACCACAGGAATTATTTAGATTCTCTCACAGGGTTCCGTCTTTCAAAATGACTGGTCAGGAAGGAGTGGGTGTACCAGCAGGATCTTATGAACTTGATCCTGGAGCTCTGTCAGTGAATCTTGAAGAGATTGCTGTTCCTGAAACTTCAGATGTGAAGGTTGGTCATAGTTCATCTGGCCTTGTGAATACAAGTCCTTCAGATAGATCAGAACTCCTTATGACATCTGAGGGAGATGCATCTATTCCCAAGGTTAATTTGGAAAGAAGCAATTTGGCAAGAGAGAACAAGGATTCTGTTGATGACAGTGATAATTGTTGTGCCCCTCCAGTATTAAGCTCAGAAACCATCGAAGTTCCAGATACTCAATTCTTCGATTTTGATGCTGGGAGGGCCCTTGAAAAGTTTCAGATTGGTCAGATTTGGGCATTTTACAGTGATGAGGATGGATTGCCAAAATATTATGGTCAGATTAAAAAGATTGCGACAAGCCCGGATCTTGAATTGCATGTTTACTGGCTTACTAGCTGCTGGCTACCAGAGAATACCATTAATTGGGATGACAAAGATATTCTTATTTCCTGTGGCAGATTTGAAGTTAATAAAACAGATGATCTTCTCAGTGTTTATAGTACTACCTCTTGTGTTTCACATCAAGTGCATGCTGATGCTGTTGGTAAGAATAAGAATTATGCCATCTTTCCGAGGAAAGGTGAAGTTTGGGCATTATATAGAAAATGGACAAATAAAATGAAATGTTTTGAGATGGAAAATTGCGAGTATGACATAGTTGAAGTTGTTGAAGAAACTGATCTGTCCATAAATGTTTTAGTTCTGGAGTTTGTTAGTGGGTATACTTCAGTTTTCAGGGGCAAATCAAATGAAGGATCATCAGTCAATCTACGAATACCCAGAGAAGAGTTGCTTAAGTTCTCCCACCAAATCCCAGCTTTCAAACTGACAGAAGAGCATGGCAATCTTAAGGGCTTCTGGGAACTTGATCCAGGTGCACTACCAATGCATTATTATGGCTTGAAATGA 3135 0.4003 MVSVSLSHFQNREVIAGSFSFLSLPSFLLPKILKIHIQQGVVTYNLVNLKSTSVYRLGDWWDVGLNVASLGHSIHYNIFPSGSLMDCNKEEALRAKDIAEKKMENRDFVGARKIALKAQQLYPDLENIAQMLVVCDVHCSAEQKLYGNEMDWYEILQVEQTAGDAIIKKQYRKFALQLHPDKNNFAGAEAAFKLIGEAQRVLLDREKRSLFDMKLRVPMNKPAMSRFDSTVRNNVRSHSTSSNARQQQQQSRQPAQQQQQNGDRPTFWTVCPFCSVRYQYYKEILNKSLCCQNCKRPFFAYEVNVQSTSSPASNSTQQASDQQKDGLNHGTFKMGAGSHGNSQAEKSNMGPYDKKRPSNVSGKPYGKRKRKQVAESSEGSDSMRTNDSEEDIVAGKDGNSGVENHSTSREGLPRRSTRQKHQVSYKENVKNSDNGFLKPRGDGESHGETTKINDQNGLAPELKEVKQKQHLYSERNEETKTDKGKDAVGGSTQMDGTSEHSPDSTSKAENHPNVYVYPDAEFSDFDKGKNKECFTAGQIWAIYDTSEGMPRFYALIRKVLSPGFRLQIIWFEPHPDCKDEINWVNEEMPVACGKYKLSDIDITEDHLMFSHPVLCEKISRNTFKVYPRKGETWALFKNWDIKWYMDVKSHQLYEYEIVEILTDYVEGEGVYVAYMAKLKGFVSLFLRNINEENKSFQIPPQELFRFSHRVPSFKMTGQEGVGVPAGSYELDPGALSVNLEEIAVPETSDVKVGHSSSGLVNTSPSDRSELLMTSEGDASIPKVNLERSNLARENKDSVDDSDNCCAPPVLSSETIEVPDTQFFDFDAGRALEKFQIGQIWAFYSDEDGLPKYYGQIKKIATSPDLELHVYWLTSCWLPENTINWDDKDILISCGRFEVNKTDDLLSVYSTTSCVSHQVHADAVGKNKNYAIFPRKGEVWALYRKWTNKMKCFEMENCEYDIVEVVEETDLSINVLVLEFVSGYTSVFRGKSNEGSSVNLRIPREELLKFSHQIPAFKLTEEHGNLKGFWELDPGALPMHYYGLK 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00198 1044 PRINTS DnaJ domain signature 153 171 IPR001623 -
Gma17g00198 1044 PRINTS DnaJ domain signature 171 186 IPR001623 -
Gma17g00198 1044 PRINTS DnaJ domain signature 187 207 IPR001623 -
Gma17g00198 1044 Gene3D DnaJ domain 148 267 IPR036869 -
Gma17g00198 1044 MobiDBLite consensus disorder prediction 308 512 - -
Gma17g00198 1044 SMART dnaj_3 150 207 IPR001623 -
Gma17g00198 1044 CDD DnaJ 151 204 IPR001623 -
Gma17g00198 1044 MobiDBLite consensus disorder prediction 233 263 - -
Gma17g00198 1044 Pfam DnaJ domain 151 212 IPR001623 -
Gma17g00198 1044 MobiDBLite consensus disorder prediction 308 327 - -
Gma17g00198 1044 MobiDBLite consensus disorder prediction 491 511 - -
Gma17g00198 1044 Pfam Domain of unknown function (DUF3444) 513 719 IPR024593 -
Gma17g00198 1044 Pfam Domain of unknown function (DUF3444) 812 1021 IPR024593 -
Gma17g00198 1044 ProSiteProfiles dnaJ domain profile. 151 215 IPR001623 -
Gma17g00198 1044 SUPERFAMILY Chaperone J-domain 146 217 IPR036869 -
Gma17g00198 1044 MobiDBLite consensus disorder prediction 368 396 - -
Gma17g00198 1044 MobiDBLite consensus disorder prediction 461 485 - -
Gma17g00198 1044 PANTHER - 71 1042 - -
Gma17g00198 1044 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 71 1042 - -
Gma17g00198 1044 MobiDBLite consensus disorder prediction 408 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00198 Gma-Chr17 1627794 1631557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00198 88 303 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.389 4.34e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00198 - - gmx:100789112 2033.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00198 17 1627794 1631557 Gma17g00198 17 1627794 1631557 ECH
Gma17g00198 17 1627794 1631557 Gma15g00932 15 7763904 7769199 PCT
Gma17g00198 17 1627794 1631557 Gma13g01880 13 34148743 34151955 PCT
Gma15g00932 15 7763904 7769199 Gma17g00198 17 1627794 1631557 PCT
Gma13g01880 13 34148743 34151955 Gma17g00198 17 1627794 1631557 PCT