Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00184 ATGTCTCCTTCAGTTTCTTCTCAAGAAAAAGGAAGTAGGAATAAGCGAAAATTCAGAGCTGATCCACCTCTAGGGGAGCCAAATAAGTTTATTCCTGCACCTCAACTCGAGTGCCTCAGTTATGAATTCTCTGCTGAGAAGTTTGAAATAACCCCAGGTCACAGGCAAGTCGCTGCTTGTGACCTGTGTGGTCTTAGCCAAGATCATTCTGATGGACTGAAACTTGGCCTTGGATTGTATAGTCCTGGAACATCTGAGGTCGGGCCTAGTCAATCTAAGGACAAACCTGAGACAGATGAAATTAACGATGCAGATTGGAGCGATCTCACAGAAGCCCAGCTGGAAGAACTTGTCCTGACTAACTTGGACATCATTCTCAAGAGTGCAATTAAAAAAATTGTAGCATGTGGCTACACTGAAGAAGTTGCCACTAAGGCCATTTTAAGACCTGGCATCTGTTATGGATGTAAAGATACTTTGTCTAATATTGTTGATAATACTTTAGCATTTCTTAGAAATGCCCAAGAGATTGATACATTACGAGAGCACTATTTTGAAGATCTAGTGCAGCTTGAGAAGTATGTCTTGGCTGAATTAGTTTGTGTTCTTCAGGAGGTTAGGCCATTCTTCAGTGTTGGGGATGCAATGTGGTGTTTGTTAATTTGTGACATGAATGTGTCACATGCTTGTGCAATGGACTGTAACCCATTAAGTAGTTTAGGTAATGATAATACTACTAGTGCTGGTTCTTCTAGCCAAGCAGAACCACAATCAAAAGCAGAAACCAAATGTCCTGAACTGAGTCTTCTAAGTCCCAGTAAATCAATTCCTGCAGGTTCTCATTATTCTCAATCAAAGAAACCCTTTGTGACTGGAATTCCTGTTGTGAACAACTTGAATTCTCAAATTATTGGTGGAACCTCAGAGAAGGAGGGCGCCAGTTGTGGATCTGAGTGCATTAATAAAGCATTCAGTGCTGCAGGAACATCTCAATCTGGCCTGATGGAAGAAAAGCGTGGAACAGTTAGAAAGGTTCATTCTGGTAGCACCATGAGAGACTACGTTCTTCGACACAAGTCATTTCACGTAGAAAAAAAATTTCGTACTTATGAATTAAAAGGATCTTCAAGAGGAGGAAAGGTTAATGGCCTGAGTGGTTTAGTCTTGGATAAAAAACTTAAATCTGTGTCAGAATCTTCTACCATAAACTTAAAGAGTGCATCCTTACAGATAAGTAAGGCAATGGGCATTGATACTACTCAAGACAATATTAATGTTAACTTCTCCAGTAATGCTGGGACTTCTACCTCCACTGCATTTAGCCCGGTGGATTCTTCTAATGCTGTTTGTAGATCAACCAATACTTCATTTGCAATAAATGCAGCACATACTATACCTTTATTCAGTTGTCCAGCTTCATTATCAGCTACCAATACAGATCTTTCTCTCTCATTGTCTTCAAAAATCAAGCCTTCTACGGAATCTGTCTGCAGTAATAATGAAGCACCTAATAGTAGTTATATGGGAATACCGTATAATAATATTAAGTCCCCAAGGCAGTGGATACCACAGGATGGAAAGGATGAGATGCTTTTAAAACTGTTTCCAAGGGTTCAGGAGCTGCAAAATCAGCTTCAAGAATGGACAGAGTGGGCCAATCAGAAGGTTATGCAAGCTGCTTGTCGTCTGAGTAAGGAAAAGGCTGAGCTTCAGACACTAAGGCAAGAGAAAGAGGAAGTTGAACGTCTAAAAAAAGAGAAGCAATCTCTAGAGGAAAATACCTTGAAGAAGCTTTCTGAGATGGAAAATGCCCTGTGTAAAGTTAGTGGGCAGGTAGAGCGAGCTAATGCCGCTGTCCGGAAGCTCGAAGTGGAGAAGGCTGCATTGAGGAAAGAGATGGAGGCTGCTAAGATACATGCCACAGAAACCGCTGCAAGCTGTCAAGAGGTCTCAAGGAGGGAAAAGAAGGCACAAATAAAGTTTCAGTCATGGGAAAAGCAGAAATCCTTCTTTAAGGAAGAGCTAACGATTGAAAAACAAAAATTGGCTCAGCTGCTGCATGAATTAGAACAAGCTAGAGTGCAACAGGAGCAAGTTGAGGGTAGATGGCAGCAGGAAGCAAAGGCAAAGGAAGAACTTATCCTGCAGGCCAGTTCTATAAGAAAGGAAAGAGAACAAATTGAGGAATCAGGAAAGTCCAAGGAGGATGCGATCAAATTAAAAGCAGAGAGGAATCTGCAAAGTTACAGAGACGACATCCAAAAACTTGAAAAGGAAATTTCCCAACTAAGACTGAAGACTGACTCTTCAAAAATTGCTACACTGAGGATGGGCATTGATGGATGCTATGCCAGAAAATTCTTGGACATAAAAAATGGCACTGCTCAGAAGGAACCCTGGGCTTCTTTCATCTCAGAACTAGTCATTGACCACTCAGCAACTGGCAGTGTAAAACGGGAACGAGAATGTGTGATGTGTCTTTCAGAGGAGATGTCTGTTGTATTCCTCCCATGTGCTCATCAGGTTGTTTGCACACCATGTAATGAGCTCCATGAGAAGCAGGAGAAAACAGGGAGGGAAAAGTACAACTACCATTTCCATTTTGAGAAGCTGCACTGTATATTAACTATTAACAAAGCTCTTCTTTCTCGTTATTTTCTATCTTCAGTGTATAGCAGCAGGAAGACAGATAAGAGATGTCTTCCATAG 2709 0.4127 MSPSVSSQEKGSRNKRKFRADPPLGEPNKFIPAPQLECLSYEFSAEKFEITPGHRQVAACDLCGLSQDHSDGLKLGLGLYSPGTSEVGPSQSKDKPETDEINDADWSDLTEAQLEELVLTNLDIILKSAIKKIVACGYTEEVATKAILRPGICYGCKDTLSNIVDNTLAFLRNAQEIDTLREHYFEDLVQLEKYVLAELVCVLQEVRPFFSVGDAMWCLLICDMNVSHACAMDCNPLSSLGNDNTTSAGSSSQAEPQSKAETKCPELSLLSPSKSIPAGSHYSQSKKPFVTGIPVVNNLNSQIIGGTSEKEGASCGSECINKAFSAAGTSQSGLMEEKRGTVRKVHSGSTMRDYVLRHKSFHVEKKFRTYELKGSSRGGKVNGLSGLVLDKKLKSVSESSTINLKSASLQISKAMGIDTTQDNINVNFSSNAGTSTSTAFSPVDSSNAVCRSTNTSFAINAAHTIPLFSCPASLSATNTDLSLSLSSKIKPSTESVCSNNEAPNSSYMGIPYNNIKSPRQWIPQDGKDEMLLKLFPRVQELQNQLQEWTEWANQKVMQAACRLSKEKAELQTLRQEKEEVERLKKEKQSLEENTLKKLSEMENALCKVSGQVERANAAVRKLEVEKAALRKEMEAAKIHATETAASCQEVSRREKKAQIKFQSWEKQKSFFKEELTIEKQKLAQLLHELEQARVQQEQVEGRWQQEAKAKEELILQASSIRKEREQIEESGKSKEDAIKLKAERNLQSYRDDIQKLEKEISQLRLKTDSSKIATLRMGIDGCYARKFLDIKNGTAQKEPWASFISELVIDHSATGSVKRERECVMCLSEEMSVVFLPCAHQVVCTPCNELHEKQEKTGREKYNYHFHFEKLHCILTINKALLSRYFLSSVYSSRKTDKRCLP 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00184 902 Coils Coil 739 773 - -
Gma17g00184 902 Pfam Family of unknown function (DUF6592) 125 232 IPR046527 -
Gma17g00184 902 PANTHER OS05G0141500 PROTEIN 1 854 - -
Gma17g00184 902 Coils Coil 556 600 - -
Gma17g00184 902 Coils Coil 672 702 - -
Gma17g00184 902 Coils Coil 612 639 - -
Gma17g00184 902 PANTHER OS05G0141500 PROTEIN 1 854 IPR046934 -
Gma17g00184 902 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 809 875 IPR013083 -
Gma17g00184 902 Pfam Zinc finger, C3HC4 type (RING finger) 820 855 - -
Gma17g00184 902 Coils Coil 710 730 - -
Gma17g00184 902 MobiDBLite consensus disorder prediction 245 264 - -
Gma17g00184 902 MobiDBLite consensus disorder prediction 1 29 - -
Gma17g00184 902 MobiDBLite consensus disorder prediction 245 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00184 Gma-Chr17 1540923 1548247 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00184 - - gmx:100785921 1664.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00184 17 1540923 1548247 Gma17g00184 17 1540923 1548247 ECH
Gma17g00184 17 1540923 1548247 Gma15g00946 15 7900733 7904804 PCT
Gma17g00184 17 1540923 1548247 Gma13g01864 13 33961656 33966012 PCT
Gma15g00946 15 7900733 7904804 Gma17g00184 17 1540923 1548247 PCT
Gma13g01864 13 33961656 33966012 Gma17g00184 17 1540923 1548247 PCT