Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00169 ATGCCTCATGATCAGAGAAAAAAGTCATCTGTAGATATAGACTTCTTTACAGAATACGGTGAAGGGAGTAGATACAAAATAGAGGAAGTAATAGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCATATGATACACACACCGGAGAAAAGGTTGCAATAAAGAAAATCAATGACATATTTGAACATGTTTCTGATGCCACGCGCATTCTTCGTGAGATCAAGCTTCTTAGACTCTTACGCCATCCTGATATTGTGGAGATCAAGCATATTTTGTTACCTCCTTCTAGAAGGGAGTTCAAAGATATATATGTTGTTTTTGAACGTATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATTTGACTCCAGAGCATTATCAGTTTTTTCTCTATCAGCTTCTTCGAGGCTTGAAGTATATACACCGAGCAAATGTTTTTCACCGAGATCTAAAGCCAAAAAATATTTTAGCAAATGCTGACTGCAAACTGAAGATTTGTGACTTCGGTCTTGCCAGAGTGGCTTTCAATGATACACCAACTGCTATATTTTGGACAGATTATGTTGCAACAAGGTGGTATAGAGCTCCTGAATTGTGTGGATCCTTTTTCTCCAAGTATACCCCAGCTATAGACATATGGAGCATTGGCTGCATTTTTGCAGAACTTTTAACTGGAAAACCTCTTTTCCCAGGGAAGAATGTTGTCCATCAATTGGACCTCATGACTGATTTTCTTGGAACACCGTCTCCTGAAGCCATTGCTAGGGTACGGAATGAGAAAGCTCGGAGATACTTGAGTAGCATGCGTAAGAAGAAGCCAGTTCCTTTCTCCCAAAAGTTTCCTAATGTAGACCCCCTTGCTCTTCGTGTGTTACAAAGAATGCTGGCATTTGAACCTAAGGATCGACCTACTGCTGAAGAGGCTCTAGCAGATTCTTATTTTAAAGGCTTGGCCAAGGTTGAGAGAGAGCCTTCTGCCCAGCCAGTTACCAAGATAGAATTTGAATTCGATAGACATAGGATAACAAAGGAAGACGTGCGAGAGCTTATATACCGAGAGATTCTGGAGTACCATCCGAAGATGTTAAAAGAACATCTAGAGGGAGCCGAGCCAACAGGATTCATGTATCCAAGTGCGGTGGATCACTTCAAGAAGCAATTTGCATATCTTGAGGAGCATTATGGAAAAGGTGGAACTGTTACTCCACCCGAGAGGCAACATGCATCATTACCCAGGTCATGTGTGTTGTATTCAGATAACTCAAGACCAAATATGGCTGAGGTTGCAGATGATATCTCCAGGTGTAGCATCAAAGAAGTTGAGAAGCCAGCCATGGACAGGACTGGTGGTATCCCAATGGCCAGGCTTCCTTTACAAGCTCCTCAAAATATTCAAGGCGTTGCTGCATGGCCCAGAAAAGGTGTAGGTTCTGTATTGCATTACAACAACTGTGGGGTAGCAGTTACAGCTGTTGCTGAGCAGCGGAAGATGGGTAGAAATCCGTCTGTTTCAGCCCAGTATGCTGCTCCAAGCAGTTCATATCCAAGACGAAACCCAAGCTGTAAAAGTGAGAAGGTGGAAGAGGGGATTGAAGGTGCTAATGGACTTCAGACTAAGCCTCAGTACATAGCACGAAAAGTTGTTGCTGCTGCTCAAGGGGGACCTGGTGGTAATTGGTATTGA 1689 0.4275 MPHDQRKKSSVDIDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFERMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHRANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSPEAIARVRNEKARRYLSSMRKKKPVPFSQKFPNVDPLALRVLQRMLAFEPKDRPTAEEALADSYFKGLAKVEREPSAQPVTKIEFEFDRHRITKEDVRELIYREILEYHPKMLKEHLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVTPPERQHASLPRSCVLYSDNSRPNMAEVADDISRCSIKEVEKPAMDRTGGIPMARLPLQAPQNIQGVAAWPRKGVGSVLHYNNCGVAVTAVAEQRKMGRNPSVSAQYAAPSSSYPRRNPSCKSEKVEEGIEGANGLQTKPQYIARKVVAAAQGGPGGNWY 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00169 562 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 9 470 - -
Gma17g00169 562 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Gma17g00169 562 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gma17g00169 562 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00169 562 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Gma17g00169 562 MobiDBLite consensus disorder prediction 499 535 - -
Gma17g00169 562 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Gma17g00169 562 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Gma17g00169 562 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00169 562 MobiDBLite consensus disorder prediction 501 521 - -
Gma17g00169 562 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 470 - -
Gma17g00169 562 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00169 562 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00169 Gma-Chr17 1421100 1432931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00169 1 562 MAP Kinase Gene Family AT5G19010 77.913 0.0 905
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gma17g00169 Pkinase 1.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00169 - K04371 gmx:100781650 1083.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00169 17 1421100 1432931 Gma17g00169 17 1421100 1432931 ECH
Gma17g00169 17 1421100 1432931 Gma15g00965 15 8083341 8089422 PCT
Gma15g00965 15 8083341 8089422 Gma17g00169 17 1421100 1432931 PCT