Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00157 ATGAACATGGTTTCGGTGTCAGCAGCGGTGTGCAAGCCCGTAGTAGCGAGTTTCAACCCGGCATCACTGAGGAATATGGACTCGCTGTCCCTTTTTCGTCACCACCGCAACAACAAGGAGAAAGTAGTGGTAATCATGGGCGCAACGGGGACAGGAAAGTCAAAACTGGCAATAGACCTCGCCACGCAATTCCCACCAGCGGAGATAGTCAACTCCGACAAAATGCAAGTGTACGAAGGCCTAGACATCACCACGAACAAAGTCACCGAGGAAGAGCGTCGCGGGGTCCTACACCATCTCCTAGGCACGGTCAACCCCAACACCAACTTCACCGCCCAAGACTTTTGCGACCACGCCACACTCGCCGTTGGCTCCATTTTGGGCCGTGACGGTTTACCCATCATTGCGGGTGGGTCCAATTCCTTCCTCGACGCGTTGGTCAACCATCACACCGAGTTTCGGTTACGCTACGAGTGCTGCTTCCTCTGGGTCGATGTTTCACTCCCCGTCCTTCATTCCTCTCTCTCCGCACGTGTGGATCGCATGATCCACGCTGGCCAGGTCCACGAGGTTCGAAAAAGCTTTCAGTACCATAACGACGATTATACCGTAGGTTTACGAAAGGCCATTGGCGTCCCTGAGTTTCATGATTTTTTCAGAGCCGAAGCCGACGGAGCCGATGAGAGGACCAAACAGCGGCTCCTCGAGGCTGCCATTGCTTCCCTCAAAACCAACAACTGCAGCCTCGCCAACCGACAGGTCCAGAAGATTCATCGTCTTTACGGCATGTGGAAAAGGAACATGCACCGCCTCGACGCCACCGAGGTTTTTCTCAAGAACGCTACTCGCCAGGAGGAGGCAGAGGAGGCGTGGGAGGATCACGTGTTGTCCAAGAGCAGAAGGATTCTCAATAAGTTTCTGTATGAGGATACGCATGTCGCTCCCGCAGGTATTGCTGCGTCAGTTGTTATTGCTTCTTCGCCGCCAGCCATGGCTGCCGCCGCCGCCGCCGCAACTCACTAG 1023 0.5484 MNMVSVSAAVCKPVVASFNPASLRNMDSLSLFRHHRNNKEKVVVIMGATGTGKSKLAIDLATQFPPAEIVNSDKMQVYEGLDITTNKVTEEERRGVLHHLLGTVNPNTNFTAQDFCDHATLAVGSILGRDGLPIIAGGSNSFLDALVNHHTEFRLRYECCFLWVDVSLPVLHSSLSARVDRMIHAGQVHEVRKSFQYHNDDYTVGLRKAIGVPEFHDFFRAEADGADERTKQRLLEAAIASLKTNNCSLANRQVQKIHRLYGMWKRNMHRLDATEVFLKNATRQEEAEEAWEDHVLSKSRRILNKFLYEDTHVAPAGIAASVVIASSPPAMAAAAAAATH 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00157 340 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 31 313 - -
Gma17g00157 340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 200 IPR027417 -
Gma17g00157 340 Pfam IPP transferase 76 150 - -
Gma17g00157 340 Pfam IPP transferase 154 255 - -
Gma17g00157 340 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 31 313 IPR039657 -
Gma17g00157 340 CDD NK 42 93 - -
Gma17g00157 340 Gene3D - 39 307 IPR027417 -
Gma17g00157 340 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 168 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00157 Gma-Chr17 1326473 1328434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00157 156 311 C2H2 Transcription Factor Family AT2G27760 30.220 2.16e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00157 K10760 - gmx:100778430 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00157 17 1326473 1328434 Gma17g00157 17 1326473 1328434 ECH
Gma17g00157 17 1326473 1328434 Gma15g00976 15 8180875 8181837 PCT
Gma17g00157 17 1326473 1328434 Gma13g01838 13 33678181 33679247 PCT
Gma15g00976 15 8180875 8181837 Gma17g00157 17 1326473 1328434 PCT
Gma13g01838 13 33678181 33679247 Gma17g00157 17 1326473 1328434 PCT