Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00152 ATGGGAATTTCATGGAGTAATAGTAACAGTAACAGTAGCAGCAGAAGAAGAAGAAACACTTACTTTCATCCTCATCCTCCACCCCCTTACTATTACCATCCACTGCCGCCACCGCCACAAGGTTACTTTGTTGCCTCAACCAACCCTTCTGCTTCTACCACCACCGGCTACGTTGGTCCTCCTCCTCCTCCTACTCAGTATTACCCAAATGGCTTCACTGCCAATTCCGTGATGCCAAATCAGGGTGGAAGTGGAATCCATGCTTCGCCACCCCCCTATCATAAACACACTCTGCGCCTCCACCTAGATCCTAACAATCCAGATCACCACTTGATTTCCTTTTATTTTGATGCCCTCTATGATTGCAGCATTACGATCTTCTACTTGGCCAAAGAAGAAGAAAAATGTTGGTTTATTCCACTTTTTCCTGATGTGTTTGAGCCAATCACATTCCCCTTTCAAAAAGGAGCTGGCCAGAAATTTTGTCAGCCTTCTGGAACAGGCATTGACCTAGGTTTTTTTGAGTTGGATGATCTTTCTCGGCCCTCACCCGAAGAAGATGTGTTTTCCCTGGTTATATGTGCTGAAACTACTACTGAGTTATATGGAATAGGAAGTTCAACAGCAGCAGATTTTGATGATAATGATCCTGGGAAGGAGTGTGTGATATGCATGACTGAACCCAAGGACACTGCTGTCTTAACCTGCCGACATATGTGTATGTGCGGTGATTGTGCCAAGGCTTTGCGGCCTCAATCAAATAAATGCCTGATATGTCGTCAACCAATTGAGGAACTTATAGAGATCAAGATAAACAATGGCAATCAGTGA 831 0.4452 MGISWSNSNSNSSSRRRRNTYFHPHPPPPYYYHPLPPPPQGYFVASTNPSASTTTGYVGPPPPPTQYYPNGFTANSVMPNQGGSGIHASPPPYHKHTLRLHLDPNNPDHHLISFYFDALYDCSITIFYLAKEEEKCWFIPLFPDVFEPITFPFQKGAGQKFCQPSGTGIDLGFFELDDLSRPSPEEDVFSLVICAETTTELYGIGSSTAADFDDNDPGKECVICMTEPKDTAVLTCRHMCMCGDCAKALRPQSNKCLICRQPIEELIEIKINNGNQ 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00152 276 PANTHER MAHOGUNIN 1 199 IPR045194 GO:0061630
Gma17g00152 276 PANTHER MAHOGUNIN 199 276 IPR045194 GO:0061630
Gma17g00152 276 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 1 199 - -
Gma17g00152 276 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 199 276 - -
Gma17g00152 276 SUPERFAMILY RING/U-box 215 266 - -
Gma17g00152 276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 206 270 IPR013083 -
Gma17g00152 276 MobiDBLite consensus disorder prediction 53 74 - -
Gma17g00152 276 MobiDBLite consensus disorder prediction 1 17 - -
Gma17g00152 276 Pfam Zinc finger, C3HC4 type (RING finger) 219 265 - -
Gma17g00152 276 ProSiteProfiles Zinc finger RING-type profile. 221 260 IPR001841 -
Gma17g00152 276 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00152 Gma-Chr17 1274490 1276394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00152 31 276 C3H Transcription Factor Family AT3G06140 44.108 6.41e-68 213
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00152 17 1274490 1276394 Gma17g00152 17 1274490 1276394 ECH