Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00101 ATGTTCCCTGCCTTAGGATTTCCGGTCAACCTTAGCCCCTCCGATCCCAACCATCGGACGGTCCTTGCTGAAGTTGACTTCCTCTCCGCTAGAAACAATTCATCACCTCACACTAACGATCATGGAACCCCTCCTAAGTCTTATCCCCATGTAAATACCGGTTTACAACTTCTCACCGCAAACGCTGGGAGTGACCAGTCGACGGTGGATGATGGGGCCTCGTCGGATGCTGAAGATAAGCGTGCCAAGATGACTGAGCTGGCACGACTGAAAGAGGACCTTCGAAACATGAATGCAGAGAACCAAAAGCTGAAGGAGATGCTCAGCCATGTCAGCAGTAACTACGCGAACTTGCAAATGCATCTTGCAGCAGTACTGCAACAGCAACAGAACCAACGCACTGAGAGCACGGAACAAGAGGTTGTTCAAGGAAAATTAGCTGAGGAGAGAAAGCATGGAGTTGGCGGAGGAACGGTGCCTAGACAATTCCTGAGTTTAGTTCCAAGTGAAATAGATGATCAAGTATCTAATTCTTCTTCCGGTGAAAGGACTCGATCAACCACACCTCCCAGCAATAAAAATGATAAGGATAACAAAGAGACTGATGACAAGTTGAACCCTTCCAACCCTACGACGGATCCATCCACTAGTCCAGAAGCCGCTATGAGAAAAGCTCGTGTCTCAGTCCGTGCCCGATCAGAAGCACCCATGATCAGTGATGGGTGCCAATGGCGAAAATATGGACAAAAGATGGCTAAGGGAAACCCTTGTCCTCGAGCATACTACAGATGCACTATGGCAGTTGGCTGCCCAGTTCGCAAACAAGTTCAACGTTGTGCGGAGGACAGAACAATTTTGACAACAACGTACGAAGGGACCCATAACCATCCACTGCCACCAGCTGCTATGGCCATGGCATCGACCACTGTAGCTGCTACTAGCATGTTGTTGTCTGGGTCAATGTCCAGTGCTGATGGAAAAATGAACCCCAATTTGCTAACTGGAGCTATTCTTCCATGCTCTAACATGGCAACACTTTCAGCTTCAGCACCATTCCCCACAGTGACATTGGACCTCACACACAACCCAAATGCGTTGCAGCAGTACCAATTAAGACCTCAAACTCAAACCCCATTCCTCCCGTCACCGCCTCAGAACTTTATGTCTGGACCCACAACACCACAACTGCCGAAACTGATTGCACAAGTGCTCTATAATCAATCCAAATTCTCAGGCCTTCAACTTTCTCAGGATGTGGGGCCTAATAATTCCCAAGCTCCAACACCGTCCTTGTTGCAGCCAAGCCAACAGGTCTCACTCACTGACACCGTCAGTGCCATCACCGCGGATCCAAACTTCCCCGCAGCGCTCACGGCCGCCATCTCCTCCATTATCGGTGGTGCTAATCCAAACAACAACAACAACAGTAGCAATCCCAATGCACTTCAATATTTTGGTGTATTTAATTTGCTTTGTGACTGGGTCATTTGTGCTATGAACTTCAGCTCAATTACTCTCGTAGGCCATTGGGTTGGTGTAACAACCCCAATCATAGATTGGGGTTTACACAATGATGAGTAA 1581 0.4832 MFPALGFPVNLSPSDPNHRTVLAEVDFLSARNNSSPHTNDHGTPPKSYPHVNTGLQLLTANAGSDQSTVDDGASSDAEDKRAKMTELARLKEDLRNMNAENQKLKEMLSHVSSNYANLQMHLAAVLQQQQNQRTESTEQEVVQGKLAEERKHGVGGGTVPRQFLSLVPSEIDDQVSNSSSGERTRSTTPPSNKNDKDNKETDDKLNPSNPTTDPSTSPEAAMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILTTTYEGTHNHPLPPAAMAMASTTVAATSMLLSGSMSSADGKMNPNLLTGAILPCSNMATLSASAPFPTVTLDLTHNPNALQQYQLRPQTQTPFLPSPPQNFMSGPTTPQLPKLIAQVLYNQSKFSGLQLSQDVGPNNSQAPTPSLLQPSQQVSLTDTVSAITADPNFPAALTAAISSIIGGANPNNNNNSSNPNALQYFGVFNLLCDWVICAMNFSSITLVGHWVGVTTPIIDWGLHNDE 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00101 526 MobiDBLite consensus disorder prediction 31 81 - -
Gma17g00101 526 PANTHER WRKY TRANSCRIPTION FACTOR 6 15 477 - -
Gma17g00101 526 MobiDBLite consensus disorder prediction 31 71 - -
Gma17g00101 526 ProSiteProfiles WRKY domain profile. 233 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g00101 526 SUPERFAMILY WRKY DNA-binding domain 231 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma17g00101 526 MobiDBLite consensus disorder prediction 169 188 - -
Gma17g00101 526 Gene3D WRKY domain 223 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma17g00101 526 Pfam WRKY DNA -binding domain 240 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma17g00101 526 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 15 477 IPR044810 GO:0003700
Gma17g00101 526 MobiDBLite consensus disorder prediction 147 235 - -
Gma17g00101 526 MobiDBLite consensus disorder prediction 189 206 - -
Gma17g00101 526 Coils Coil 77 114 - -
Gma17g00101 526 SMART WRKY_cls 238 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00101 Gma-Chr17 908593 911527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00101 17 469 WRKY Transcription Factor Family AT1G62300 53.131 7.37e-136 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma17g00101 WRKY 4.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00101 - - gmx:100784668 900.968