Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00089 ATGAACAACTCAAAGCAACAGAAGCAGCTCCAACAAAGAGGATGCAAGACCTTCTGTTGCAGTTGCAGGTTCAGTGTTTCTTCCACTGAGGAAGCAGAAAGCTCATCAGCCTCCGATAGGTTCCCTTCTGTTTCAAGCCTTGCACATGCCATGGTGCAAGAGAGGCTTGACCAAATGATTAGAGCTAGGCATGTAGAGAGAAGAAGGCAGCACGACAGAGAAGGGACCAAGTTTGTTGTAATGGTAGCAATGGAGAAGAGCTCTTATGATCCAAGAGAGGATTTTAGGGAGTCCATGATGGAGATGATTACTGCCAAGCACCTTCAAGACGCCAAAGATCTTCGTAGTCTATTGAACTATTATATCTCCATGAACTCTGATGAGTACCATAGTCTTATCCTTGAGGTTTTTCATGAGGCTATCAGAGGGCTTTTACAGTGGACGGGGGAAGGTCGAGGTGGAGGATTGGCGATGATGAGGTGGGTGGTGAGGTGA 495 0.4667 MNNSKQQKQLQQRGCKTFCCSCRFSVSSTEEAESSSASDRFPSVSSLAHAMVQERLDQMIRARHVERRRQHDREGTKFVVMVAMEKSSYDPREDFRESMMEMITAKHLQDAKDLRSLLNYYISMNSDEYHSLILEVFHEAIRGLLQWTGEGRGGGLAMMRWVVR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00089 164 ProSiteProfiles OVATE domain profile. 84 143 IPR006458 -
Gma17g00089 164 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 11 145 IPR038933 GO:0045892
Gma17g00089 164 Pfam Transcriptional repressor, ovate 88 141 IPR006458 -
Gma17g00089 164 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 82 145 IPR006458 -
Gma17g00089 164 PANTHER TRANSCRIPTION REPRESSOR-RELATED 11 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00089 Gma-Chr17 804564 807811 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma17g00089 Ovate 1.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00089 - - gmx:112999988 273.478