Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00068 ATGCAAACGTCTCAGAAGCACCCTAGTTCAGCTGGTGCCCATTTCTATCACCAGCCTGTGCAAGGCATTTACCAAATGTTGCAAAGCAATCTATGCCAAGATAGCAGCAGCCAGGGAACAAGTGTTTCATTTGAAACCTGTAAGGAGCAATACTTTACTCTGGAATCATGCCCAGCACCCACTAATGATTTCATGGATTGTGATGATTCTCCTTCCTATGCCAGTGTATCATCTAAAAGGACTCCATTTTCTCCACAAGGTTCTCAGTCATGCTATTCAGATCACCACCAGTCCTCTGACAACACCTATGGTTCGCCAATAAGTGGCTTGTCTAGTGTTGATGACCGGCATCAACTAAAGCACAAGCTAAGAGAACTAGAGATTTCATTGTTGGCGCCTGAGGAATCAGACATTACAGACAGTTGCGGCTGCTGCGTCGTCAAGGGTGGCCTCCATGGATCATCTCAGTTGGCCAAACATAACTGGGATCAGATAGCAGAAAATATTGCACAATTTGACTTGAAAGGAGCCCTCAAGGTATGTGCACAGGCTGTGTCTGACGATGATGTTCCGACAGCAAGAGGCTGGATAGATAATGTACTGGGGAAATTGGTATCAGTCTCTGGTGATCCAATCCAGAGGTTGGGTGCTTACTTGTTAGAGGGGCTTAGAGCAAGGTTGGAATCATCAGGGAATCTCATCTACAAATCCCTTAAGTGTGAACAACCAACAAGCAAAGAGCTAATGAGTTACATGCACATTTTGTACCAGATTTGCCCATACTGGAAGTTTGCATACATATCTGCAAATGCTATCATCCAAGAAACAATGGCAAATGAGTCAAGGATTCATATAATTGATTTTCAAATTGCGCAGGGCACACAGTGGCATTTACTTATCCAGGCTCTTGCACATAGGCCAGGGGGACCCCCCTCCCTTCGTGTGACCGGTGTTGATGACTCACAGTCGACTCATGCACGAGGTGGAGGACTTTGGATTGTTGGAGAAAGGCTTTCAGATTTTGCCAGGTCTTGTGGAGTTCCATTTGAATTCCACAGTGCTGCAATATCTGGCTGTGAGGTTGTACGAGGAAATATTGAAATCCGAGCAGGGGAAGCTCTGGCTGTAAACTTTCCTTATGTTTTGCACCACATGCCAGATGAGAGTGTGAGCACCGAAAATCACAGGGATAGATTGTTGAGGTTGGTTAAGAGCTTGTCTCCCAAGGTTGTTACCTTTGTTGAGCAAGAATCCAACACCAACACTTCTCCTTTCTTTCAGAGGTTTGTTGAGACCTTGGATTATTATACTGCAATGTTTGAATCTATAGATGTGGCTTGCCCCAGAGATGATAAGAAGAGGATTAGCGCAGAGCAGCACTGCGTGGCACGAGACATGGTCAACATGATAGCTTGTGAGGGGGTTGAGAGGGTGGAGAGGCATGAACTTTTTGGAAAGTGGAGGTCAAGACTTTCCATGGCTGGATTTAAACAGTGTCAATTGAGTTCTTCAGTGATGGTTGCTACCCAAAATCTCCTAAAGGAGTTCAGTCAAAATTATAGGCTTGAACATAGAGATGGTGCTCTTTATCTTGGCTGGATGAACAGACATATGGCCACCTCTTCTGCTTGGAGATGA 1638 0.4512 MQTSQKHPSSAGAHFYHQPVQGIYQMLQSNLCQDSSSQGTSVSFETCKEQYFTLESCPAPTNDFMDCDDSPSYASVSSKRTPFSPQGSQSCYSDHHQSSDNTYGSPISGLSSVDDRHQLKHKLRELEISLLAPEESDITDSCGCCVVKGGLHGSSQLAKHNWDQIAENIAQFDLKGALKVCAQAVSDDDVPTARGWIDNVLGKLVSVSGDPIQRLGAYLLEGLRARLESSGNLIYKSLKCEQPTSKELMSYMHILYQICPYWKFAYISANAIIQETMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPSLRVTGVDDSQSTHARGGGLWIVGERLSDFARSCGVPFEFHSAAISGCEVVRGNIEIRAGEALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTFVEQESNTNTSPFFQRFVETLDYYTAMFESIDVACPRDDKKRISAEQHCVARDMVNMIACEGVERVERHELFGKWRSRLSMAGFKQCQLSSSVMVATQNLLKEFSQNYRLEHRDGALYLGWMNRHMATSSAWR 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00068 545 ProSiteProfiles GRAS family profile. 165 545 IPR005202 -
Gma17g00068 545 Pfam GRAS domain family 177 545 IPR005202 -
Gma17g00068 545 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 15 544 - -
Gma17g00068 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 544 IPR005202 -
Gma17g00068 545 MobiDBLite consensus disorder prediction 75 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00068 Gma-Chr17 650025 651662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00068 1 545 GRAS Transcription Factor Family AT4G17230 59.707 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma17g00068 GRAS 7.8e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00068 - - gmx:100776109 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00068 17 650025 651662 Gma15g01095 15 9227178 9231080 PCT
Gma17g00068 17 650025 651662 Gma09g00113 09 913479 917248 PCT