Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00053 ATGGGCAATGTGAACGTGACTCCTGAAGAAGAAGAAGTTTCTGCAAGTGCAAGGGCAACCGATGAGAACGCCATGCCTCAGTCTCCTCCCACCTCTCCTACGGCTACCCATTTCCCCCTCATATTCGCTCCTCAGGTTCCGGTGGTTCCGCTACAAAGACCTGATGAGATGCATGTTCCAAGTTGTTCCTGGATGGAGACAACTTCAGGGTATGAAGATGTGTACCGCGAAGTAGGAATTCCAACAGTGATTACTTGGAGTTATGATGGAAAGGAAGTAGCTGTGGAGGGATCGTGGGATAATTGGAAAACAAGAATGCCCCTGGAGAGATCAGGGAAGGACTTTGCAATAATGAAGGTTCTGCCATCTGGTGTTTACCAGTACAGATTTATTGTGGATGGACGGATGAGGTACACTCCAGACTCGCCTTGGGCCCAAGATGATGCTGGGGATGCTTACAACATCTTGGACTTACAGGATTATGTTCCTGAAGACATTGGAAGCATTTCTAGTTTTGAGCCTCCTCAATCACCAGACTCGAGTTATGATAACTTATATCTTAGTTCTGAAGATTATGCTAAGGAGCCACCATTAGTTCCTCCACTCTTGCAAATGACACTGCTAAATGTGCCTGCAACAAATATGAAAATCCAACCTCCTATGTCAAGACCTCGACATGAAGTGCTGAATCATCTTTACGCACAAAAAGGAAAGAGCAGTCCTTCAGTGGTTGGCCTTGGTACAACTCATCGGTTTCTAGCCAAATATGTCACTGTTGTGCTGTACAAGTCGTTGCAAGGTAAACCATAA 810 0.4568 MGNVNVTPEEEEVSASARATDENAMPQSPPTSPTATHFPLIFAPQVPVVPLQRPDEMHVPSCSWMETTSGYEDVYREVGIPTVITWSYDGKEVAVEGSWDNWKTRMPLERSGKDFAIMKVLPSGVYQYRFIVDGRMRYTPDSPWAQDDAGDAYNILDLQDYVPEDIGSISSFEPPQSPDSSYDNLYLSSEDYAKEPPLVPPLLQMTLLNVPATNMKIQPPMSRPRHEVLNHLYAQKGKSSPSVVGLGTTHRFLAKYVTVVLYKSLQGKP 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00053 269 CDD E_set_AMPKbeta_like_N 81 157 - -
Gma17g00053 269 MobiDBLite consensus disorder prediction 20 35 - -
Gma17g00053 269 Pfam Glycogen recognition site of AMP-activated protein kinase 80 159 IPR032640 -
Gma17g00053 269 SUPERFAMILY AMPKBI-like 162 264 IPR037256 -
Gma17g00053 269 SMART AMPKBI_2 175 265 IPR006828 GO:0005515
Gma17g00053 269 MobiDBLite consensus disorder prediction 1 37 - -
Gma17g00053 269 Gene3D Immunoglobulins 75 162 IPR013783 -
Gma17g00053 269 SUPERFAMILY E set domains 80 165 IPR014756 -
Gma17g00053 269 Gene3D - 168 265 - -
Gma17g00053 269 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2 1 266 - -
Gma17g00053 269 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 266 IPR043554 -
Gma17g00053 269 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 193 263 IPR006828 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00053 Gma-Chr17 552950 555470 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00053 K07199 - gmx:100805688 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00053 17 552950 555470 Gma15g01114 15 9393191 9396088 PCT
Gma17g00053 17 552950 555470 Gma09g00132 09 1059302 1062558 PCT