Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00045 ATGGACATGGACGGGCATAGAAGCAGCGGCACCGGCACCGGCGTGTGTGAGATAGAAGAAGTGGACGAGAATTCGAACGAGAGGCAACTCCATGATGATGATGATGATGATGAAGAAGAGTACTGTGTTTATGTAGCAGTGGGTAAGAGCGACACAAGCATGGACGCTCTCTCATGGGCTCTCAACAACTTTGTTGCTCAATCACCATCTACCATCATTTATCTCATTCATGTTTTCCCTCAGATCAACCACATTCCAAATCCATTGGGAATAGGAATGATTCCAAGGAATCAAGTGAGTGCTGAGCAGGTGGAGAGTTATATTGACCAAGAAAGAGGCAAGAGGAGAGAGCTCCTTCAGAAATTCCTACAATCATGCTCTACTTCCAAGATAAAACAACAAAATTATTCAGAACAGGTTAAGGTAGACACCATCCTGATTGAGAGTGACTCAGTTGCAAAGGCTATCCTCGACCTGATTCCCATTCTTCAAATAAAAAGGCTAGTGATTGGAGCCAACAAACTTCATCTAAGAAAATCAAAATCAAGGAGAGGGAAAGGCATAGCCGATCAGATACTGCAGAATGCACCACAAAGTTGCAAGGTGAGAATTATATGTGAAAAGAAGGAAGTAAATGAGCAGATGATGTCATTGTCACCCTTCCCACAGCCGCTTGCCACTTGCACCTCTGCTAATGATGCTTCTATAACCAGTAAAAAAGAAGATCATCAAAACGATTTGGTTTCATGTATTTGTTTCATACCCAAGTTTAAATGA 777 0.4234 MDMDGHRSSGTGTGVCEIEEVDENSNERQLHDDDDDDEEEYCVYVAVGKSDTSMDALSWALNNFVAQSPSTIIYLIHVFPQINHIPNPLGIGMIPRNQVSAEQVESYIDQERGKRRELLQKFLQSCSTSKIKQQNYSEQVKVDTILIESDSVAKAILDLIPILQIKRLVIGANKLHLRKSKSRRGKGIADQILQNAPQSCKVRIICEKKEVNEQMMSLSPFPQPLATCTSANDASITSKKEDHQNDLVSCICFIPKFK 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00045 258 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 5 257 - -
Gma17g00045 258 CDD STK_N 43 207 - -
Gma17g00045 258 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 45 177 - -
Gma17g00045 258 Gene3D HUPs 42 205 IPR014729 -
Gma17g00045 258 MobiDBLite consensus disorder prediction 1 37 - -
Gma17g00045 258 Pfam Universal stress protein family 44 199 IPR006016 -
Gma17g00045 258 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 5 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00045 Gma-Chr17 478904 480578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00045 46 209 Plant U-box Gene Family AT5G57035 29.268 1.25e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00045 - - gmx:100527773 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00045 17 478904 480578 Gma15g01130 15 9647296 9649413 PCT
Gma17g00045 17 478904 480578 Gma09g00144 09 1188186 1193397 PCT