Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00037 ATGCGAGGAACAATTGACCCTGAGAAGGCGAGGGGCAAAATATTAGTTTGCCTTAGAGGTGTCACTGCAAGAGTGGAAAAGAGCCTGGTTGCTTTGAAGGCTGGTGCAGCAGGGATGATTCTTTGTAATGACGAGCTTAGTGGTAATGAGCTTATTGCTGATCCTCATCTCCTGCCTGCATCACAAATTAATTATGAAGATGGTCTAGCTGTCTATGCCTACATGAATTCAACCAAGAATCCGCTAGGATATATTGATCCTCCCAAGACCAAGTTGCAGATAAAGCCTGCTCCATCCATGGCAGCTTTCTCCTCTAGAGGGCCCAACATAGTCACACCAGAGATCCTCAAGCCTGATGTCACTGCTCCCGGTGTGAACATTATTGCTGCCTACTCAGAAGGGGTTAGCCCAACAGATATGGACTTTGATAAGCGCAGGGTTCCTTTTATCACCATGTCTTGTCCTCATGTGGCTGGAGTTGTTGGCCTTCTCAAGACTCTCCACCCTGACTGGAGTCCAACAGTTATTAAATCTGCATTACTGACAACTGCTAGAACAAGGGACAACACTGGTAAGCCAATGCTTGATGGGGGGAACAATGCTAACGCAACGCCATTTGCCTATGGATCTGGCCACATCAGACCAAACCGTGCCATGGATCCCGGGTTGGTGTATGACTTAACCAACAATGATTACCTAAACTTTCTTTGTGTCTCTGGCTATAACCATAGTCAGATAGAGATGTTCTCTGGTGCTCATTATCGTTGTCCCGATATAATAAACATCCTGGATTTTAACTACCCTACAATAACAATACCAAAACTCTACGGCTCAGTTAGTTTGACACGGAGGGTGAAAAATGTTGGGTCACCAGGCACTTATACTGCAAGACTCAAAGTACCAGTAGGTCTTTCCATATCTGTGGAACCTAATGTGTTAAAATTTGACAACATTGGTGAAGAGAAGAGCTTTAAGCTGACAGTGGAAGTTACAAGACCAGGTGTGGCTACTACATTTGGAGGTATAACATGGTCAGATGGCAAACATCAAGTTCCTCGCTCTCTCCCTTGGCCTCCTCAAGACTCGTCTAAAGTGACACAGAACGCTATCTGGGTATATTATTTACAAATGGAGAAGCAGAAGATGAAGAGAGCAAGAGAAGGAGATGATGAAACTCAGAACGCAAAGAAAAGAGATGCGTGTGGCATGAAGGACGTGAAAAAGGAGGAGGGTTGTTCTTCGGAGGCACTTGGGGTATTTGATTTCCCTTGGCTGAAAGATGGTGTCACGTCTAAATCAGAGGACTACTTGTTGGATTTTGAAGACAATTTCTCGTCATTGCTAGAACAAGAAGACTCTTCCTTTCAAGCTGCAACTGCAAGTATTCATTTCTCGTCAGAAGCAAAGTTGGAGAATCTTGCATGGCAGCCATTTGAAAGTGATGTGTTAGAGCTTGAAGCTGATGATGTGGATTGCATTTGGACCTCTCTGCTCAAACAGCCTCTCTGA 1509 0.4467 MRGTIDPEKARGKILVCLRGVTARVEKSLVALKAGAAGMILCNDELSGNELIADPHLLPASQINYEDGLAVYAYMNSTKNPLGYIDPPKTKLQIKPAPSMAAFSSRGPNIVTPEILKPDVTAPGVNIIAAYSEGVSPTDMDFDKRRVPFITMSCPHVAGVVGLLKTLHPDWSPTVIKSALLTTARTRDNTGKPMLDGGNNANATPFAYGSGHIRPNRAMDPGLVYDLTNNDYLNFLCVSGYNHSQIEMFSGAHYRCPDIINILDFNYPTITIPKLYGSVSLTRRVKNVGSPGTYTARLKVPVGLSISVEPNVLKFDNIGEEKSFKLTVEVTRPGVATTFGGITWSDGKHQVPRSLPWPPQDSSKVTQNAIWVYYLQMEKQKMKRAREGDDETQNAKKRDACGMKDVKKEEGCSSEALGVFDFPWLKDGVTSKSEDYLLDFEDNFSSLLEQEDSSFQAATASIHFSSEAKLENLAWQPFESDVLELEADDVDCIWTSLLKQPL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00037 502 Gene3D Peptidase S8/S53 domain 93 232 IPR036852 GO:0004252|GO:0006508
Gma17g00037 502 Gene3D - 236 355 - -
Gma17g00037 502 ProSiteProfiles Serine proteases, subtilase domain profile. 1 219 - -
Gma17g00037 502 Pfam Fibronectin type-III domain 264 351 IPR041469 -
Gma17g00037 502 Gene3D - 3 92 - -
Gma17g00037 502 SUPERFAMILY Subtilisin-like 67 223 IPR036852 GO:0004252|GO:0006508
Gma17g00037 502 Pfam Subtilase family 71 195 IPR000209 GO:0006508|GO:0008236
Gma17g00037 502 SUPERFAMILY PA domain 10 73 IPR046450 -
Gma17g00037 502 CDD PA_subtilisin_like 1 85 - -
Gma17g00037 502 PANTHER PEPTIDASE S8 22 351 - -
Gma17g00037 502 Pfam PA domain 9 70 IPR003137 -
Gma17g00037 502 PANTHER BNAC02G33520D PROTEIN 22 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00037 Gma-Chr17 419955 423239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00037 2 351 Subtilisin-like Serine Gene Family AT5G59810 57.103 1.03e-139 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00037 - - gsj:114393449 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00037 17 419955 423239 Gma15g01144 15 9804150 9804655 PCT
Gma17g00037 17 419955 423239 Gma09g00159 09 1340471 1340968 PCT