Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00029 ATGCTGGTTTATGAGTATGTTCAAAATGGAAGTTTAAAGGATGCTCTCTCAGGGAAGTCAGGAATTAGATTAGATTGGATTAGAAGGCTGAAAATTGCCCTTGGTACTGCCCGTGGTTTGGCTTATCTTCACGAACTTGTTAATCCTCCCATCATACATAGGGACATCAAATCAAACAATATTTTGCTGGATGACCGCCTAAATGCCAAAGTTGCTGATTTTGGTCTCTCCAAGTCTATGGTTGATTCTGAGAAAGATCATGTTACCACTCAAGTTAAAGGAACAATGGGTTACTTGGATCAAGAGTATGATATGTCTCAACAATTGACTGAAAAAAGTGACGTTTATAGCTTTGGAGTGCTAATGTTGGAGCTGATTTCAGCAAGAAGGTCGTTGGAACGAGGGAAGTATATTGTGAAAGAGGTTAAGAATGCACTTGATAAGACAAAAGGGTTATATGGTCTTCATGAAATCATTGACCAGGCCATTGGTCTACCATGA 501 0.3932 MLVYEYVQNGSLKDALSGKSGIRLDWIRRLKIALGTARGLAYLHELVNPPIIHRDIKSNNILLDDRLNAKVADFGLSKSMVDSEKDHVTTQVKGTMGYLDQEYDMSQQLTEKSDVYSFGVLMLELISARRSLERGKYIVKEVKNALDKTKGLYGLHEIIDQAIGLP 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00029 166 SMART serkin_6 2 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00029 166 PANTHER OS01G0253100 PROTEIN 1 163 IPR045271 GO:0004714|GO:0006468
Gma17g00029 166 SUPERFAMILY Protein kinase-like (PK-like) 1 132 IPR011009 -
Gma17g00029 166 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
Gma17g00029 166 ProSiteProfiles Protein kinase domain profile. 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma17g00029 166 PANTHER KINASE PBS1, PUTATIVE-RELATED 1 163 - -
Gma17g00029 166 Gene3D Transferase(Phosphotransferase) domain 1 1 163 - -
Gma17g00029 166 Pfam Protein tyrosine and serine/threonine kinase 1 130 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00029 Gma-Chr17 348849 349453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00029 1 163 Receptor kinase-like Gene Family AT5G49760 72.393 1.26e-80 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Gma17g00029 PK_Tyr_Ser-Thr 3.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00029 - - gmx:100811702 306.219