Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00026 ATGGCAATTGCAGCTGCAAACTCATCACCCACCATGAGCCTCAGCCATAGCCAGAGCCAAGAGGATGCCACCACCGCCTCCACCACCAACAAGCCCGTCGACGTCGACGATAATGATGATCACGAGCACGACATGGTCATGCCCGGCTTTCGCTTCCACCCAACTGAAGAAGAGCTCGTGGAATTCTACCTTCGCCGTAAGGTGGAGGGAAAGCGTTTCAACGTTGAGCTTATTACTTTCCTCGATCTTTATCGCTATGACCCTTGGGAGCTTCCCGCCTTGGCAGCTATTGGTGAGAAGGAGTGGTACTTCTATGTGCCCAGAGATAGGAAGTATCGCAACGGTGATCGTCCCAATCGTGTTACTACCTCTGGGTATTGGAAGGCAACAGGAGCTGATAGGATGATCCGAACCGAGAATTTTCGCTCTATCGGCCTCAAGAAAACCCTAGTTTTCTATTCTGGGAAAGCTCCTAAAGGCATACGAACCAGTTGGATTATGAACGAGTATCGCTTGCCGCAACATGAAACTGAACGATATCAAAAGGCTGAGATATCGCTTTGCCGTGTGTACAAGAGAGCTGGAGTGGAGGACCATCCTTCCCTCCCTCGCTGCCTCCCAACGAGGCCATCCTCGTCAAGGGCTTCTCATGACAATAATAAGAAGCACAATGAAATGGTTCAGCACAACATCAACATGGGATTCGTGGGACAATTAAAGCCGCCAACAACTGAACACATAGTTGACAAAATTAATGAAACGGAAGCAAGCAGTGATGTCAACACAGCTCTTGGACTTTCCAAATACAATGCTGCTTACCGTGCTGCAATGGGAGCACTCAGCACCACAATGGCACTTCCAGTTGTTCCAATGGATCATGAGGAAGGCTTGATGATGATGCAGCAGCAATCTAAGCAAGCTGCAGCACATGTTCCAACAATCTTCTCTGCTGGGCCTTCCAGTTCCAACAACAGTGGAGTGGTGAATATGGATGATCTGAATAGGCTAATGAGTTATCAACAGCAGTACTACAATGTTCAAAGCCAAAGCCATCCCAATCAGTTCTCCACTTTGCTGATGCAACCTTCAGCGGTagtgtctctcagctcgctaccaaatccacttccacccaccttctctgaccgactctgggactggaatccaatccctgagcCACCAAATCAAGAGTACAGCAACATGTCCTTCAAGTAA 1212 0.4513 MAIAAANSSPTMSLSHSQSQEDATTASTTNKPVDVDDNDDHEHDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRAGVEDHPSLPRCLPTRPSSSRASHDNNKKHNEMVQHNINMGFVGQLKPPTTEHIVDKINETEASSDVNTALGLSKYNAAYRAAMGALSTTMALPVVPMDHEEGLMMMQQQSKQAAAHVPTIFSAGPSSSNNSGVVNMDDLNRLMSYQQQYYNVQSQSHPNQFSTLLMQPSAVVSLSSLPNPLPPTFSDRLWDWNPIPEPPNQEYSNMSFK 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00026 403 MobiDBLite consensus disorder prediction 1 40 - -
Gma17g00026 403 ProSiteProfiles NAC domain profile. 46 193 IPR003441 GO:0003677|GO:0006355
Gma17g00026 403 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 27 398 - -
Gma17g00026 403 Pfam No apical meristem (NAM) protein 48 172 IPR003441 GO:0003677|GO:0006355
Gma17g00026 403 MobiDBLite consensus disorder prediction 199 220 - -
Gma17g00026 403 MobiDBLite consensus disorder prediction 1 32 - -
Gma17g00026 403 SUPERFAMILY NAC domain 46 192 IPR036093 GO:0003677|GO:0006355
Gma17g00026 403 PANTHER NAC DOMAIN-CONTAINING PROTEIN 72-LIKE 27 398 - -
Gma17g00026 403 Gene3D NAC domain 55 196 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00026 Gma-Chr17 317615 319980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00026 45 209 NAC Transcription Factor Family AT2G02450 92.121 1.38e-113 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma17g00026 NAM 4.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00026 - - gmx:100792622 781.171