Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00020 ATGGAACTTTCGAGTCAAGAAGGAGAAATCCCAATCCCAATAAACAGCAGTACTACATatggacatggtaatggacatggacatggtcatggacacggacTCATGATTCACCATGACCATAACCACATTATATCCTCCTCGGCACCTTCAAACGGCATACCAACTACTATGCAGCAGCaggaggaggaggaggaggaggaggaTCGCTAcaagaaagtggttagaaacttccacagaaaggaAGTGGAGGGTGAGCCTCAGCATCATCTCAACATCAACAGAAGAAGACTCATTCTGGGCCCTCATCCTGAGGCTCTTGGCTACCCTACAGCTGCAGCCAGAAGTGTCCCACCACACCAGATGATAATGCCCTACAACATTGGAATTGGACACCACCTCCCTTCAGAATCCGATGAACAAGAAGATGCTGCTGCTGGCGCTGGAATGGTGCAGCTCAGTAGCCGACCCAGCTCTGCCCAGCTGGTcaagaaaagattcaggaccaagttcagccaggaccagaaggacaaaatgctcaactttgctgagaaggttggctggaaaatccagaagcaagaggagtctgtggtgcaacacttctgccaagagattggggtcaagagaagagtgctcaaggtttggatgcataacaataagcacaATCTCGCCAAAAAGATCAACCCCCCTACTACTACTGcaccaccaccaccaccaccaccaccTCCTTAA 729 0.2922 MELSSQEGEIPIPINSSTTYGHGNGHGHGHGHGLMIHHDHNHIISSSAPSNGIPTTMQQQEEEEEEEDRYKKVVRNFHRKEVEGEPQHHLNINRRRLILGPHPEALGYPTAAARSVPPHQMIMPYNIGIGHHLPSESDEQEDAAAGAGMVQLSSRPSSAQLVKKRFRTKFSQDQKDKMLNFAEKVGWKIQKQEESVVQHFCQEIGVKRRVLKVWMHNNKHNLAKKINPPTTTAPPPPPPPPP 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00020 242 MobiDBLite consensus disorder prediction 43 67 - -
Gma17g00020 242 MobiDBLite consensus disorder prediction 1 31 - -
Gma17g00020 242 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 163 219 IPR006455 -
Gma17g00020 242 MobiDBLite consensus disorder prediction 43 58 - -
Gma17g00020 242 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 4 75 225 - -
Gma17g00020 242 SUPERFAMILY Homeodomain-like 156 224 IPR009057 -
Gma17g00020 242 MobiDBLite consensus disorder prediction 220 242 - -
Gma17g00020 242 Gene3D - 150 224 - -
Gma17g00020 242 MobiDBLite consensus disorder prediction 1 23 - -
Gma17g00020 242 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 75 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00020 Gma-Chr17 251456 252316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00020 75 227 ZF-HD Transcription Factor Family AT1G14440 51.250 1.32e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00020 - - gmx:100803037 391.734