Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01761 ATGAATGCTTCAATGAGGAAAAAGGTTCAAAGGAAGTGTAAGATAAGAGGCTACAACCTCAAAGTCGACGCTCTGAACGAGATCCTCTCCTTCGCATCTCGCTTCGAAGGCCCCGACGAGGACGAAGCCATCGATCTCCTCCTCGTCGAGCTCGATTCATCTCTGAAATCCACCATAATCGACAAGGAGACGGTGCAGCGCGTGGTCAGCCTGTTGCTGGAAGCCACCGAGGCCACCGAGGAAACCTCCGATGCCGCCGCTGCCATTCGCGTCGTCGATGCGTTCCTCATCCCCAAGTATAAATACGACTATAGCAGAAAGCAGTTCTACGAGCACACAGGCAGCTTATCTATTCATGGAGAAGCATCAGCAAAGTCAGATCTGTACAGGGAAAGGTTTCTGTTGTTGTTCCAGAGGCTCTCTCGTGACCAGCATTTTTCAGCGCCTGCTTTTGAATCTGAATTTTCACATTTTGGGAGCTGTGAGATATCTCCCATTCAATCTCTGGTTGGGCAAACAGGTAGAAGATGGGTAATGGGAGTAATATCTCAGCTGGAGGATGGCCATTACTATTTGGAAGACCTTACAGCTGCAGTTAAAATCAACTTGTCCAATGCAAGGATAACTACAGGACTCTTTTCAGAGAACACTATAGTTGTGGCTGAAGGGGAGATGCTTGTGGAGGGTATTTTTCAGGTCTTAACATGTGGATTTCCTCCTTTGGAGGATAGAGATAAGTCAGTTACACTACTTGCAGGGCATGACTTTTTTGGCGCGGGTACTTTCACTAAAGAGGAAACTATTAGACTGGCAGAGATGGAAGAAAAAGCAGTAAATGACATGTTTATTATACTTTCTGATATTTGGCTAGACAATGAAGAGACTTTGAAAAAGCTAGAGGTTGTTCTGGATGGCTTTGAGAAGGAGATAGTGGTTCCTTCCTTATTTGTTTTCATGGGAAACTTCTCTTCTAAGCCATGTAACCTTTCATTTCATTTTTATTCGAGCCTCAGAATGCAGTTTGGTAAGCTGGGGGAAATGATTGCTGCCCATACACGACTAAAAGAGCACAGTAAATTTCTGTTTATTCCAGGTCCTGATGATGCAGGTCCTTCAAATGTTCTTCCTAGATGTGCTTTACCAAAATATTTAACTGAAGAGCTCCAAAAGCACATTCCCAATGCCATATTTTCAAGCAACCCCTGCAGGGTCAAATTTTATACCCAAGAAATTGTATTCTTCCGCCAGGATATGCTGTATAGAATGCGCCGTTCATGTTTGATGCCTCCTTCTACAGAAGAGACTTGTGATCATTTTGAACATCTTGTTGCTACCATAACCCATCAGAGTCATCTATGTCCACTTCCTCTAACCGTACAACCCATCATCTGGAATTATGACCATTGTCTTTATCTTTATCCAACTCCACACACGATAGTTTTGGGAGACAGAAGTCAGCAGAAGGCATTCAAGTACACAGGAATCACTTGTTTTAATACAGGTTCCTTCGCAATTGACAACACATTTGTGGCATATCGTCCCTGCTCTCAGGAAGTTGAATTGTCAGCCTTGCCATAA 1578 0.4385 MNASMRKKVQRKCKIRGYNLKVDALNEILSFASRFEGPDEDEAIDLLLVELDSSLKSTIIDKETVQRVVSLLLEATEATEETSDAAAAIRVVDAFLIPKYKYDYSRKQFYEHTGSLSIHGEASAKSDLYRERFLLLFQRLSRDQHFSAPAFESEFSHFGSCEISPIQSLVGQTGRRWVMGVISQLEDGHYYLEDLTAAVKINLSNARITTGLFSENTIVVAEGEMLVEGIFQVLTCGFPPLEDRDKSVTLLAGHDFFGAGTFTKEETIRLAEMEEKAVNDMFIILSDIWLDNEETLKKLEVVLDGFEKEIVVPSLFVFMGNFSSKPCNLSFHFYSSLRMQFGKLGEMIAAHTRLKEHSKFLFIPGPDDAGPSNVLPRCALPKYLTEELQKHIPNAIFSSNPCRVKFYTQEIVFFRQDMLYRMRRSCLMPPSTEETCDHFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLYLYPTPHTIVLGDRSQQKAFKYTGITCFNTGSFAIDNTFVAYRPCSQEVELSALP 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01761 525 Gene3D - 2 70 - -
Gma16g01761 525 Pfam DNA polymerase alpha/epsilon subunit B 282 487 IPR007185 GO:0003677|GO:0006260
Gma16g01761 525 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 5 523 IPR016266 GO:0003677|GO:0006261|GO:0008622
Gma16g01761 525 PIRSF DNA_pol_epsilon_2 1 525 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01761 Gma-Chr16 38802760 38808381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01761 16 481 Core DNA Replication Machinery Family AT5G22110 69.313 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01761 K02325 - gmx:100784116 1041.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01761 16 38802760 38808381 Gma09g01589 09 41130708 41133190 GST