Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01757 ATGGCTAATTTTGAGAAAGATGAGGTGCCAATTTTCTCAGAAGTTCATCCCAAACCATCAAATGAACCTGTTGATACTAAATTCCCAAGGGGGGTACCTAGGACTCGAAGTGTATCAATTTCTATTCCCTCGACACTCACGGAGCCATACGAAAGAGGTAATAATCTTGTGGGATACACTGGTCCCCTAAGGAGTCAGAGGAAAACACCATTTGATCATATGAGTGGTCCATTGTATGTTACTAATAAACATGGAAACCTTTTCCGGCATAATAGAGTGGCATCAGAGTACCAAACAGCAGAAAGTAAGGCAGAAAATTTTCCTTCATGCTGCGGCATGGGAGAAAATGATTTGCAGAACAACTATGCTGGCAAGAATGAACATTTAGTTAGGTCCGGTCCACTGGGAATGTGTAATGATCCATATTGTACAACTTGCCCAACTTACTTCAAGGCTACTCAACAAATGAATTCAAAAGCTTCGGGTATATTCAATCCTGAGTTTCGCAATACCCTCTATGGGGATGCCAGGGATTGGGCAAGAAGACTTTTTGCTTTCTTGATTCCACTTGTTCCTAGAGTTATGAATCCTCATAATAGACTTGTACAACAATGGAATAAATTTTTTGCAATTTGTTGCTTGGTGGCAATATTTGTGGATCCGTTATTTTTCTTCTTGCTCTCTGTGCAGAAGGAACATAAATGTATTGTTATACACTGGACTATGGCAAAAATGCTTGTTGTACTTAGAAGCATGAATGATTTCATACACTTCCTAAACATTGTTCTTCAGTTTAGGTTGGCTTATGTGGCTCCTGAGTCTAGGGTGGTTGGTGCCGGGGAGTTAGTTGACCATCCTAAGAAAATAGCTCTTCACTACCTTCGAACATCTTTTATTATTGACTTATTTGTTGTACTTCCACTTCCTCAGATATTCATATTGTTTGTCCTACCAAAACACTTGGGGTCATCAGGAGCAAACTATTCGAAGAATATTTTGCGTATCGTGATCCTTGTTCAGAATATTCCCAGATTGTGTTGGTTTCTTCCTATGCTAATTTCTCCAACAGGATCTATATTTGAGTCACCATGGGCAAGTTTCTTTATAAATCTTTTTACCTTTATGCTATCTGGCCATGTTGTTGGGTCGTGGTGGTACCTCTTTGGTTTGCAGAGGGTTAATCTGTGCCTACGAGTTGTCTGCAAGAAACAATTCAAAGCATATATTGATGAATGCGCAAAATTCATTGATTGTGGGCATGGTCAAGCTGAAGCAAATCAAAATAACGCAATCATGCTTAATTGGAGGAACAGTTCTGTTGCAAGTGTATGTTTTACTGAAGATGGTTTTCCATATGGGATCTATAATAAAGCTGTCAACCTTACTGCGGATCATAATGTGATCACTAGATATGTATATTCATCATTTTGGGGATTCCAGcaaattagtaCTCTGGCTAGCAATTTAACCCCCAGCTATTTTGTTTGGGAAGTCATTTTTACCATGATCATCATAGGATCGGGACTGTTGCTGTTTGCTCTTCTCATTGGAAACATACAAAACTTTCTTCAGGCTCTTGAACGCAGGAGACTAGAAATGACACTTAGACGACGTGATGTTGAGCAATGGATGAGCCATCGGCACTTAGCAGAAGATCTGAGAAGGAAAGTGCGACAAGCTGAACGTTATAACTGGGCCGCAACAAGAGGTGTGAATGAAGAAATGCTCCTTGAGAATTTGCCAGAAGACCTCCAAAGGGACATCAGACGTCATCTCTTTACATTTATTAAGAAAGTTCGAATTTTTGCTTTGTTGGATGAGCCTATCTTGGATGCCATATGTGAGAGGCTAAGACAAAAAACATATATCAAAGGAAGCAAAATTTTGTATGATGGCGGTTTGGTAGAGAAGATGGTTTTTATTGTGCGTGGAAAATTGGAGAGTGTTGGCGAAGATGGAATTAGTGCTCCCCTTTATGAAGGGAGTGTTTGTGGTGAAGAACTTCTGACATGGTGTCTTGAGCATCCTTTAGCAAGCAAAGGTTGTGGAAAAGCAAGGATTCCAAAGCAAAAGTTGGTTAGTAACCGGACAGTATGTTGCTTAACGAATGTGGAGGCATTTGCCCTTAGAGCAGCAGACCTTGAAGAAGTTACAAGCATTTTTGCAAGATTCTTTCGGAGTCCCCGTGTTCAAGGAGCCATAAGGTATGGATCACCTTACTGGAGATGCTTTGCAGCAACAACCATCCAGGTTGCATGGAGATACAGGATGAAATGTCTTAGTCGTGCTGACACTACTCGATCAAATGAAACATCAAACATTTACAATTCACTGTAA 2337 0.4014 MANFEKDEVPIFSEVHPKPSNEPVDTKFPRGVPRTRSVSISIPSTLTEPYERGNNLVGYTGPLRSQRKTPFDHMSGPLYVTNKHGNLFRHNRVASEYQTAESKAENFPSCCGMGENDLQNNYAGKNEHLVRSGPLGMCNDPYCTTCPTYFKATQQMNSKASGIFNPEFRNTLYGDARDWARRLFAFLIPLVPRVMNPHNRLVQQWNKFFAICCLVAIFVDPLFFFLLSVQKEHKCIVIHWTMAKMLVVLRSMNDFIHFLNIVLQFRLAYVAPESRVVGAGELVDHPKKIALHYLRTSFIIDLFVVLPLPQIFILFVLPKHLGSSGANYSKNILRIVILVQNIPRLCWFLPMLISPTGSIFESPWASFFINLFTFMLSGHVVGSWWYLFGLQRVNLCLRVVCKKQFKAYIDECAKFIDCGHGQAEANQNNAIMLNWRNSSVASVCFTEDGFPYGIYNKAVNLTADHNVITRYVYSSFWGFQQISTLASNLTPSYFVWEVIFTMIIIGSGLLLFALLIGNIQNFLQALERRRLEMTLRRRDVEQWMSHRHLAEDLRRKVRQAERYNWAATRGVNEEMLLENLPEDLQRDIRRHLFTFIKKVRIFALLDEPILDAICERLRQKTYIKGSKILYDGGLVEKMVFIVRGKLESVGEDGISAPLYEGSVCGEELLTWCLEHPLASKGCGKARIPKQKLVSNRTVCCLTNVEAFALRAADLEEVTSIFARFFRSPRVQGAIRYGSPYWRCFAATTIQVAWRYRMKCLSRADTTRSNETSNIYNSL 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01757 778 Gene3D Jelly Rolls 599 723 IPR014710 -
Gma16g01757 778 ProSiteProfiles cAMP/cGMP binding motif profile. 601 679 IPR000595 -
Gma16g01757 778 CDD CAP_ED 601 717 IPR000595 -
Gma16g01757 778 MobiDBLite consensus disorder prediction 1 33 - -
Gma16g01757 778 SUPERFAMILY Voltage-gated potassium channels 197 529 - -
Gma16g01757 778 Gene3D Helix hairpin bin 527 593 - -
Gma16g01757 778 SUPERFAMILY cAMP-binding domain-like 529 724 IPR018490 -
Gma16g01757 778 Gene3D - 206 526 - -
Gma16g01757 778 Pfam Ion transport protein 205 529 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma16g01757 778 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 765 - -
Gma16g01757 778 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED 6 765 - -
Gma16g01757 778 SMART cnmp_10 601 736 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01757 Gma-Chr16 38772752 38783744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01757 5 681 Ion Channels AT3G17700 58.858 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01757 K05391 - gmx:100782506 1591.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01757 16 38772752 38783744 Gma09g01585 09 41098132 41111984 GST