Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01755 ATGGCTCATTTTGAAAAAGATGAGGTGCCAATGCTGTCAGAAACACATGCTCGACTATCTGATGAAGTTGTGGATTCTAATTTCCGGAGGCTTGTATCTAGGACACGAAGTGCTTCAATTTCTATTCCTATGGCCTCCTTGGAATCATATGAGAAAGAAACTAATCTTGTAGGACATACTGGTCCACTTCGCAGTGTGAGAAAAACCCCCTTTGTGCAGATGAGTGGTCCACTGTATGCTACCAATGGAACTGGAAATCTTTCACGACAGAATATAGTTGCGACAGGAACCAAAGTAGTGGAGAGCAAGACAGAAAAGTTTTCTACTTTTGATGGCACGAATGAAAATCGTTGGGATAATGACTATGATAGAAAGAATGAGCACTTAATGAGGTCTGGGCAACTGGGAATGTGTAATGATCCTTGTTGTACTACTTGCCCCTCTTATGTCAAGGCTTCTCAACCAAGAACCCGGAAAACTTCAGCTATATTTGATCCCAAGTTCCACAATAATCTTTATGGGGATGCCAAGGGTTTTGGAAGAAAACTTTATTCCTTCTGCTCTCGATATGTTCTTGGAGTTATGAATCCTCATAATAAATTTCTACAACGATGGAACAAGATTTTGGCCATTTTTTGCTTGGTGGCAATTTTTGTTGATCCATTATTTTTCTTCTTAATCTATGTGAAGAAGAATGAAAAATGTATTGCTATCAATCAGACAATGACAACAACACTTGTTTTATTTAGAAGCATTAATGATTTGATATATTTCTTTAACATTCTTCTCCAGTTTAAGTTGGCTTATGTTTCTCCTGAGTCAACGGTAGTAGGTGCTGGAGATTTAGTTGACCATCCCAAGAAAATTGCTCTTAATTATCTGAAGGGTTATTTTTTCATCGACCTATTTGTTGTATTGCCTCTTCCTCAGATAATGATATTATTTGTCCTACCAAAGTACCTGGGATTATCAGGAGCTAATTATGCTAAAAATCTTCTGCGTGCTGCCATCCTTGTGCAGTATTTTCCCAGATTATTCAGATTTCTGCCTCTGCTAATTGGCCAGTCTCCTACAGGATTCATATTTGAGTCAGCCTGGGCAAATTTCATTATAAATCTTCTCATTTTTATGCTATCTGGCCATGTTGTTGGTTCTGGCTGGTACCTCTTTGGTCTACAGAGGGTTAATCAATGCTTGCGAAATGCCTGCCGTGATTCTAATATTACTGGATGCTCAGCATTCATTGATTGTGGCTATGGCGCTGACGATGTATCTGGCCGGGCAGAAGTGTGGAACAACAATGTAAATGCCACTGCTTGTTTGAATTCAAGTTCTGATGCTTTTAAGTATGGGATCTATGTAAATGCTGTACCACTTACTATAGAAACTAGGGTGGTCCACAAATATGTATTTGCACTGTTTTGGGGATTCCAGCAAATCAGTACCCTGGCTGGTAATCAAACCCCAAGCTATTTTGTGTGGGAAGTACTTTTTACAATGGCCATCATAGGATTGGGACTCTTGCTTTTTGCACTTCTCATTGGAAATATACAGAACTTTCTGCAGGCTCTTGGACGCAGGAGGCTAGAAATGCAACTTAGAGGTCGTGATGTTGAGCAATGGATGAGCCACCGTCGCTTACCCGAAGATCTAAGAAGGAGAGTACGTCATGCTGAACGGTATAGTTGGGCAGCAACAAGAGGAGTGAATGAAGAAATACTTCTGGAGAATATGCAGGAAGATCTCCAGACAGACATAAGACGTCATCTCTTCAAATTTGTTAAAAAAGTTCGAATCTTCGCCCTGATGGATGAGCCTATCTTAGATGCCATTTGTGAGAGACTAAAACAAAAGACATACATCAAAGGAAGTAAAGTTTTGAGTCAGGGGAGTCTTGTAGAGAAGATGGTCTTTGTTGTACGTGGGACATTGGAGAGCTTTGGGGATGATGGAACTATGGTTCCCTTATCTGAAGGGGATGCTTGTGGTGAAGAACTTCTGACATGGTATCTTGAGCATTCTTCTGTAAGCACAGATGGTAAAAAAGTAAGGGTTCAAGGACAGAGGTTGCTGAGCAACAGGACAGTAAGATGCTTAACAAACGTGGAGGCATTTTCACTTCGAGCTGCAGACCTTGAGGAACTGACAATTCTTTTCACAAGATTCTTGCGGAACCCTCATGTTCAAGGAGCACTAAGGTATGTATCACCTTACTGGAGATCCCTTGCAGCAAACCGTATTCAGGTTGCATGGAGATACAGGAAGAAGCGTCTAAGTCGTGCTAATACCTCGCAATCAGATCAAACATTGATTGCATAG 2319 0.4075 MAHFEKDEVPMLSETHARLSDEVVDSNFRRLVSRTRSASISIPMASLESYEKETNLVGHTGPLRSVRKTPFVQMSGPLYATNGTGNLSRQNIVATGTKVVESKTEKFSTFDGTNENRWDNDYDRKNEHLMRSGQLGMCNDPCCTTCPSYVKASQPRTRKTSAIFDPKFHNNLYGDAKGFGRKLYSFCSRYVLGVMNPHNKFLQRWNKILAIFCLVAIFVDPLFFFLIYVKKNEKCIAINQTMTTTLVLFRSINDLIYFFNILLQFKLAYVSPESTVVGAGDLVDHPKKIALNYLKGYFFIDLFVVLPLPQIMILFVLPKYLGLSGANYAKNLLRAAILVQYFPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVGSGWYLFGLQRVNQCLRNACRDSNITGCSAFIDCGYGADDVSGRAEVWNNNVNATACLNSSSDAFKYGIYVNAVPLTIETRVVHKYVFALFWGFQQISTLAGNQTPSYFVWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLRRRVRHAERYSWAATRGVNEEILLENMQEDLQTDIRRHLFKFVKKVRIFALMDEPILDAICERLKQKTYIKGSKVLSQGSLVEKMVFVVRGTLESFGDDGTMVPLSEGDACGEELLTWYLEHSSVSTDGKKVRVQGQRLLSNRTVRCLTNVEAFSLRAADLEELTILFTRFLRNPHVQGALRYVSPYWRSLAANRIQVAWRYRKKRLSRANTSQSDQTLIA 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01755 772 SUPERFAMILY Voltage-gated potassium channels 197 527 - -
Gma16g01755 772 Gene3D Jelly Rolls 597 721 IPR014710 -
Gma16g01755 772 SMART cnmp_10 599 717 IPR000595 -
Gma16g01755 772 Pfam Ion transport protein 207 527 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma16g01755 772 CDD CAP_ED 599 715 IPR000595 -
Gma16g01755 772 ProSiteProfiles cAMP/cGMP binding motif profile. 599 667 IPR000595 -
Gma16g01755 772 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 764 - -
Gma16g01755 772 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 764 - -
Gma16g01755 772 Gene3D Helix hairpin bin 526 591 - -
Gma16g01755 772 SUPERFAMILY cAMP-binding domain-like 527 719 IPR018490 -
Gma16g01755 772 Gene3D - 207 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01755 Gma-Chr16 38729904 38739906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01755 2 677 Ion Channels AT3G17700 61.414 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01755 K05391 - gmx:100785556 1523.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01755 16 38729904 38739906 Gma09g01582 09 41051725 41067580 GST