Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01749 ATGTCACCGGTTGGATTACCACCTGGCTTTAGGTTCCATCCAACCGATGAAGAGCTTGTCAACTATTATCTCAAGAGGAAGATCAATGGCCAAGAAATTGAACTTGATATCATTCCTGAAGTTGATCTCTACAAATGTGAACCATGGGAATTAGCAGAGAAATCATTTTTGccaagtagagacccagagtggtattttttcggcccccgggataggaaatacccgaatgggtataggacaaatagagcaactcgggcaggttactggaagtccactgggaaagacagaagagtttcatgccaaagcagacctattggcatgaagaagactttggtgtactatagaggtagagctcctcaagggatcagaactgactgggtaatgcatgagtatcgccttgatgacaaagagtgtgaggacaccactggattacagGATACTTATGCATTGTGCCGTGTGTTCAAGAAAAATGGAATCTGTTCTGATATTGAAGAGCAAGGACAATGTAGTATATCACTAATTGAGAGCTCCCAAACCATTACTAATGAGTGTGAAACCATGTCTCCTGACATACCAGGGGCATCATCATCATGCTTGGAAGAGGAGGACAAAGATGATTCTTGGATGCAGTTCATTACAGAAGATGCATGGTATTCTTCTAATGCAGCTATGGTTGGTGGTGAAGAAGTATCACATGTTACATTTACAAACTAA 714 0.2479 MSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGYRTNRATRAGYWKSTGKDRRVSCQSRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECEDTTGLQDTYALCRVFKKNGICSDIEEQGQCSISLIESSQTITNECETMSPDIPGASSSCLEEEDKDDSWMQFITEDAWYSSNAAMVGGEEVSHVTFTN 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01749 237 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 237 - -
Gma16g01749 237 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Gma16g01749 237 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Gma16g01749 237 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Gma16g01749 237 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Gma16g01749 237 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01749 Gma-Chr16 38644076 38647589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01749 1 226 NAC Transcription Factor Family AT3G17730 75.934 1.18e-132 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma16g01749 NAM 9.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01749 - - gmx:100784495 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01749 16 38644076 38647589 Gma09g01575 09 40923356 40926774 GST