Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01740 ATGAAGGATGCTTCCTTGCTGAAGGGCACGTCTCTCGCGGCCTCTTCTCTCCCTCGCGCCGCCCACACTAAAAGGTTATTGCTCTATTATTGTTTGACGATGGCTGATGCTCATGGGACTGATAAGAACATTGAGGTGTGGAAAATCAAGAAATTGATCAAAGCTCTTGAGGCTGCCAGAGGAAATGGGACAAGTATGATTTCCCTTATCATGCCTCCACGTGATCAAATATCTCGTGTCACCAAGATGCTTGGTGATGAGTTTGGAACTGCATCAAACATCAAAAGCAGGGTGAATCGACAGTCAGTTCTTGGTGCAATCACTTCTGCTCAGCAGAGGCTTAAGCTCTATAACAAGGTTCCTCCAAATGGTCTTGTTCTGTATACTGGCACAATCGTGACTGATGATGGGAAGGAAAAGAAGGTGACTATTGATTTTGAGCCTTTCAGACCTATTAATGCATCCCTTTATCTTTGTGACAATAAGTTTCATACTGAAGCTTTGAATGAACTCCTAGAGTCTGATGACAAGTTTGGATTTATTGTCATGGATGGCAATGGTACTTTGTTTGGGACCTTGAGTGGTAATACGAGAGAAGTGCTTCATAAATTCAGTGTGGATCTCCCAAAGAAACATGGAAGAGGAGGGCAATCAGCTCTGCGTTTTGCCCGTCTTCGGATGGAGAAGCGTCATAACTATGTGAGGAAGACAGCGGAGCATGCTACCCAATTCTATATCAATGCTGCCACCAGCCAACCCAATGTTTCTGGATTAATATTGGCTGGTTCAGCTGATTTCAAAACTGAGCTTAGTCAGTCAGATATGTTTGATCCTCGTCTTCAGGCAAAAATACTGAATGTTGTTGACGTCTCCTATGGAGGTGAGAATGGGTTTAATCAGGCTATTGAACTATCTGCTGAAATTCTGTCCAATGTGAAGTTTATCCAGGAAAAGCGACTGATTGGAAAATACTTTGAGGAAATCAGCCAGGATACTGGAAAGTATGTTTTTGGAGTTGATGATACTCTAAAAGCTTTGGAGATGGGAGCTGTCGAGACACTTATTGTCTGGGAAAATCTGGATATGAATAGGTATGTCTTAAAAAATAGTGCTACTGGTGAGGTTGTCATTAAGCACTTCAACAAGGAACAGGATTCCAACCAAAGCAATTTTCGGGATCCTGAGAGCAATGCTGATTTTGAGGTTCAGGAGAAGTTGTCTCTGCTGGAGTGGTTTGCAAATGAATACAAACGGTTTGGTTGCACTCTTGAGTTTGTTACCAATAAATCACAAGAAGGTTCACAGTTTTGCAGAGGTTTCGGTGGGATAGGTGGGATCTTGCGTTACCAGCTTGATATGCGATCATTTGATGATTTTTCTGATGATGGAGGCGTGGGAGCCAAGATACCTGCACCAATATGGGAGGTGGAGGTGGTTGCACCTGCTGCAGCTCCTCCTCCTCCATGTCTGTCTCTGGTGTTGCAGAGAGTGTTTGATTGTGAATCGAGATGCTCTGCCCCCAAGGTGCTCCTTTCTGATACGAGTTACCTTGTCCTTCTAACATGCACACTCTGGCACCACAAATTCCTGCAAAGCTTCTGGCAGCACCTGCTCCCCTGCTCTCTACTACTTACACCCAGAAAAGCAAGAACAAAAACATGTTTATTAGAGAAACACTATGCAGAAGCAGTGATGGTTAATCCAGATGATTTGTCACATGCAGTGTTTTCTAGGATGCTCCAGCATATACCTGGACAGCATATACTGGCACACGAGTGCTAG 1782 0.4394 MKDASLLKGTSLAASSLPRAAHTKRLLLYYCLTMADAHGTDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAEHATQFYINAATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNSATGEVVIKHFNKEQDSNQSNFRDPESNADFEVQEKLSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDDFSDDGGVGAKIPAPIWEVEVVAPAAAPPPPCLSLVLQRVFDCESRCSAPKVLLSDTSYLVLLTCTLWHHKFLQSFWQHLLPCSLLLTPRKARTKTCLLEKHYAEAVMVNPDDLSHAVFSRMLQHIPGQHILAHEC 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01740 593 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 40 173 IPR024049 -
Gma16g01740 593 SUPERFAMILY L30e-like 311 453 IPR029064 -
Gma16g01740 593 Pfam eRF1 domain 1 51 171 IPR005140 -
Gma16g01740 593 Gene3D eRF1 domain 2 169 310 IPR042226 -
Gma16g01740 593 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 34 464 - -
Gma16g01740 593 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 46 450 IPR004403 GO:0003747|GO:0006415
Gma16g01740 593 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 34 464 IPR004403 GO:0003747|GO:0006415
Gma16g01740 593 SUPERFAMILY Translational machinery components 175 309 - -
Gma16g01740 593 SMART eRF1_1_2 37 173 IPR005140 -
Gma16g01740 593 Pfam eRF1 domain 2 177 310 IPR005141 -
Gma16g01740 593 Pfam eRF1 domain 3 314 451 IPR005142 -
Gma16g01740 593 Gene3D - 312 464 IPR029064 -
Gma16g01740 593 Gene3D eRF1 domain 1 31 168 IPR024049 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01740 Gma-Chr16 38516745 38522983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01740 34 461 Eukaryotic Initiation Factors Gene Family AT3G26618 90.187 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01740 K03265 - gmx:100775731 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01740 16 38516745 38522983 Gma09g01563 09 40741258 40745420 GST