Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01737 ATGGTGGCCGGCAACGATCCTATGGTTGGATTGGAGGCTCGTGTGGTCATGGGGCCTTGGAGCATCACCAGAAACGTGGATCGGAGGGGTTTTGCAAACATGAGCGGAAAAGCCTCCGTCTCCAAGGAGCTCCATGCCAAGCACACCAAGATATTAGAGGGACTTGTTAAGCTACCTGACAACAGGGAATGTGCAGACTGCAGGACCAAGGCACCACGATGGGCAAGTGTGAACTTAGGGATATTCATTTGCATGCAATGTTCAGGAATTCACCGGAGTCTTGGAGTGCATATATCAAAGGTGCGGTCCACAACTTTGGATACATGGTTGCCAGATCAAGTTTCTTTTATGCAATTAATTGGTAATGCAAAGTCAAATAAGCACTGGGAGGCAGAATTACCGCCAAATTTTGACAGAAATGGATATGGAGTTGAGAAATTCATTCGTTCCAAGTATGTGGAGAAAAGATGGGCTTCAAAAGGTGGACTACAGCCAGCTTCAAAGTCAGCTGAAATAATCTTTAACTCGAATGAATCACCAGCTGCTAGGGCCAAGAGTGCCACTCAGAGGAATAGGAGATTGTCTCTTGAGGAAAGCATTCTTGTGAAACATGTGGCACAAATTCGGCCTCCAGTCACGAGATATCATGAGGGCTCCTCAGATTTTCAAAAGAATTCACCACCACCACCATTAAGGAAGCCATCTGCATCATTTGATTTTGACTACACTAGGGGAAAGAACAATGCTGGACAACATTTGATTGAGAAGGCTTATGAGGTGTATGTTTGA 789 0.4537 MVAGNDPMVGLEARVVMGPWSITRNVDRRGFANMSGKASVSKELHAKHTKILEGLVKLPDNRECADCRTKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPDQVSFMQLIGNAKSNKHWEAELPPNFDRNGYGVEKFIRSKYVEKRWASKGGLQPASKSAEIIFNSNESPAARAKSATQRNRRLSLEESILVKHVAQIRPPVTRYHEGSSDFQKNSPPPPLRKPSASFDFDYTRGKNNAGQHLIEKAYEVYV 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01737 262 CDD ArfGap 52 152 - -
Gma16g01737 262 Gene3D Arf GTPase activating protein 31 162 IPR038508 -
Gma16g01737 262 SUPERFAMILY ArfGap/RecO-like zinc finger 48 159 IPR037278 -
Gma16g01737 262 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 34 231 IPR044520 GO:0005096
Gma16g01737 262 Pfam Putative GTPase activating protein for Arf 50 160 IPR001164 GO:0005096
Gma16g01737 262 SMART arf_gap_3 38 165 IPR001164 GO:0005096
Gma16g01737 262 MobiDBLite consensus disorder prediction 213 236 - -
Gma16g01737 262 PRINTS HIV Rev interacting protein signature 101 122 IPR001164 GO:0005096
Gma16g01737 262 PRINTS HIV Rev interacting protein signature 61 80 IPR001164 GO:0005096
Gma16g01737 262 PRINTS HIV Rev interacting protein signature 80 97 IPR001164 GO:0005096
Gma16g01737 262 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD15-RELATED 34 231 - -
Gma16g01737 262 ProSiteProfiles ARF GTPase-activating proteins domain profile. 49 170 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01737 Gma-Chr16 38482705 38487237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01737 55 152 C2H2 Transcription Factor Family AT4G05330 50.000 1.33e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01737 K12486 - gmx:100780727 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01737 16 38482705 38487237 Gma09g01560 09 40704473 40707574 GST
Gma08g00551 08 4520116 4526808 Gma16g01737 16 38482705 38487237 PCT
Gma16g01737 16 38482705 38487237 Gma08g00551 08 4520116 4526808 PCT