Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01703 ATGACACCAACCAGCGGCGAAGGAGCTGAGAAGATGGATGCAGAAGATGGTGTAAACTGCAGTGATTATGAGCATGACATAGAAAATGAAGATTTGTGGGATGGGAATGAAGAAAGTGGAGGGTACTGGTCAGGGATATATGACAGAAACAAGGCTCATACAAAGCCACTTCTTATGAAGGGGACTAACACCACCTCCCAGATTGCTATTATTGGTGCCAACCTCTGCCCTATTGAAAGCCTTGACTATGAgatttttgacaatgaaatattgaagaatgactggagttccaggaagaaggttcagataatccattatgtgatgcttaagtggggatttgctcttcttattggattaggtactggattggttggcttctttaacagttttgcagttgagaacatagctggtttcaagctgttTATGACCACCAGTCTCATGTCTAAACACAGATATCTTGAAGCTTTCTTAGCATATGCTGGTGCGAATATGTGTTTAGCAGCAGCTGCTGCTGCACTTTGTGCTTTCATCGCTCCAGCAGCTGCAGGCTCTGGCATTCCAGAGGTAAAAGCATATCTCAATGGTGTGGATGCTCAACATATATTGGCTCCAAGCACCCTTTTTGTAAAGATATTTGGTTCCATCCTTGGAGTTTCTGCTGGATTTGTGGTGGGCAAAGAGGGGCCTATGGTACATACAGGTGCATGCATAGCTTCTTTATTGGGGCAGGGTGGATCTCGCAAGTATCACTTGACTTGCACTTGGCTTAGATATTTCAAAAATGACCGAGACCGGCGAGACATGATTACTTGTGGTGCAGCTGCTGGGGTTGCTGCTGCCTTTCGTGCACCAGTAGGTGGTGTCCTCTTTGCTCTTGAAGAGGCAGCTACATGGTGGCGGAGTGCTCTTCTTTGGAGGACTTTTTTCACAACAGCAGTGGTTGCTATTGTTTTaagagttgcaattcagttttgtgccacaggcgggaaatgtgggctatttggggaaggtggtctgataatgtatgatgttaGTTCAGCCAATATAACATATAGTGCTAGTGGGATATTTGCAGTACTACTAATGGGAGCCATTGCTGGAATTCTTGGAAGCATATATAATTACCTTGTGGATAAGGTTGTTCGGACATATAGCATCATCAATGGAAAAGGTGCATTTTCAAAAATCTCTCTTGTTGTCACAATTGCTCTTTTGACATCATGTTGTTATTATTTCTTGCCATGGATTGCATACTGCATTCCCTGCCCTTCTAATTCGACAGTGATCTGTCCCTCTGTTGATGAGTCTGGAGAATACAAAAACTTTCAATGCCCACCAGGTTACTACAATGATCTTGCTTCTCTGTTTCTAAACACCAATGATGATGCTATTCGCAATCTATTTAGCCCCAGGATAATCAAAGAGTTTCATATTACCAGTTTGTTTATCTACTTTGCTACTATTTACTGTCTTGGGATAATCACTTATGGCATTGCTATTCCATCCGGGCTCTTCATTCCTGTGATACTTGCTGGTGCTGCCTATGGCCGTCTTTTCGGCCGGCTCTTCGAAACGATCACCAAACTCGACAGAGGACTATTTGCCCTACTTGGAGCTGCTTCCTTCCTTGGTGGCACCATGAGAATGACAGTGTCTATTTGTGTCATATTGCTTGAGCTCACTAATGATCTCTTGTTACTTCCACTTGTAATGTTGGTCTTATTAGTCTCAAAAACTGTGGCAGACAGCTTCAACAAGGGTGTCTATGATCAAATACTTAAGATCAAAGGACTTCCTTATTTGGAGGCTCATGCAGAACCTTACATGAGGAATTTAGTAACACGCGATGTTGTTTCAGGTCCATTGATAACCTTTTCTGGCATCGAAAAGGTTAGGAATATATTGCATGCACTGCATACTACAGGGCATAATGGGTTTCCTGTCATTGATGAACCACCTTTCTCAGATGCACCAGAGTTATGTGGGCTTGTACTGAGGTCTCATTTACTAGTGTTACTGAAGGAGAAGATCTTTTCAAGAGATAGGGGTTTTGCGAATCCAGTGATCTTCCAAAGAATTTCTACTTTGGATTTTGGAAAGGCAGGATCAGGAAAGGAAATCAAACTAGAGGATCTTGATATCCAAGAGGAAGAGATAGATATGTATGTTGATCTCCATCCAATAACTAATGCATCTCCTTACACTGTGGTTGAGACAATGTCACTTGCCAAAGCTGCTATTCTTTTCCGCCAACATGGACTCAGGCACATGTGTGTTGTTCCAAAGAGCCAAGGGAGACCTCCAGTTGTTGGGATTCTAACTCGCCATGATTTTATGCCAGAGCATGTTTTGGGACTTTACCCTGATATCAAGCCTCACAAATGGCAATGA 2391 0.3856 MTPTSGEGAEKMDAEDGVNCSDYEHDIENEDLWDGNEESGGYWSGIYDRNKAHTKPLLMKGTNTTSQIAIIGANLCPIESLDYEIFDNEILKNDWSSRKKVQIIHYVMLKWGFALLIGLGTGLVGFFNSFAVENIAGFKLFMTTSLMSKHRYLEAFLAYAGANMCLAAAAAALCAFIAPAAAGSGIPEVKAYLNGVDAQHILAPSTLFVKIFGSILGVSAGFVVGKEGPMVHTGACIASLLGQGGSRKYHLTCTWLRYFKNDRDRRDMITCGAAAGVAAAFRAPVGGVLFALEEAATWWRSALLWRTFFTTAVVAIVLRVAIQFCATGGKCGLFGEGGLIMYDVSSANITYSASGIFAVLLMGAIAGILGSIYNYLVDKVVRTYSIINGKGAFSKISLVVTIALLTSCCYYFLPWIAYCIPCPSNSTVICPSVDESGEYKNFQCPPGYYNDLASLFLNTNDDAIRNLFSPRIIKEFHITSLFIYFATIYCLGIITYGIAIPSGLFIPVILAGAAYGRLFGRLFETITKLDRGLFALLGAASFLGGTMRMTVSICVILLELTNDLLLLPLVMLVLLVSKTVADSFNKGVYDQILKIKGLPYLEAHAEPYMRNLVTRDVVSGPLITFSGIEKVRNILHALHTTGHNGFPVIDEPPFSDAPELCGLVLRSHLLVLLKEKIFSRDRGFANPVIFQRISTLDFGKAGSGKEIKLEDLDIQEEEIDMYVDLHPITNASPYTVVETMSLAKAAILFRQHGLRHMCVVPKSQGRPPVVGILTRHDFMPEHVLGLYPDIKPHKWQ 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01703 796 SMART cbs_1 621 674 IPR000644 -
Gma16g01703 796 SMART cbs_1 732 783 IPR000644 -
Gma16g01703 796 PRINTS Chloride channel signature 179 196 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gma16g01703 796 PRINTS Chloride channel signature 210 229 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gma16g01703 796 PRINTS Chloride channel signature 274 293 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gma16g01703 796 PRINTS Chloride channel signature 500 520 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gma16g01703 796 PRINTS Chloride channel signature 532 548 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gma16g01703 796 PRINTS Chloride channel signature 550 569 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gma16g01703 796 PRINTS Chloride channel signature 588 602 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gma16g01703 796 PRINTS Plant CLC chloride channel signature 84 92 IPR002251 GO:0005247|GO:0006821|GO:0016020
Gma16g01703 796 PRINTS Plant CLC chloride channel signature 295 303 IPR002251 GO:0005247|GO:0006821|GO:0016020
Gma16g01703 796 PRINTS Plant CLC chloride channel signature 309 319 IPR002251 GO:0005247|GO:0006821|GO:0016020
Gma16g01703 796 PRINTS Plant CLC chloride channel signature 452 468 IPR002251 GO:0005247|GO:0006821|GO:0016020
Gma16g01703 796 CDD CBS_pair_voltage-gated_CLC_euk_bac 615 781 - -
Gma16g01703 796 Gene3D Clc chloride channel 101 601 - -
Gma16g01703 796 SUPERFAMILY CBS-domain pair 605 779 IPR046342 -
Gma16g01703 796 ProSiteProfiles CBS domain profile. 728 790 IPR000644 -
Gma16g01703 796 Gene3D - 602 786 IPR046342 -
Gma16g01703 796 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 33 794 - -
Gma16g01703 796 Pfam Voltage gated chloride channel 167 582 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Gma16g01703 796 Pfam CBS domain 732 778 IPR000644 -
Gma16g01703 796 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 33 794 - -
Gma16g01703 796 SUPERFAMILY Clc chloride channel 91 604 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01703 Gma-Chr16 37963483 37974696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01703 24 794 Ion Channels AT5G49890 70.065 0.0 1055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01703 K05016 - gmx:100809070 1498.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01703 16 37963483 37974696 Gma09g01510 09 39850339 39859622 GST