Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01692 ATGAACTTCGTTCGCAATTGTGTCAAGCTATGCATTCTTCGCTTCATCCACCTTCCAAACTCGAACGACCATCTCCTCACCGTCGTGTCTCTCCGCCGCTGCCACCACACCTCCGGCATCCCCAACAGAGTGATGGAAGAAAAAGTGAAATTGGCTCATTACAAAGTCGGGTCTTTGCCAACTCTATTTTATGTTCCTGACTTCATCACAGACAGTGACCAAAGCCTTCTACTCAACAACATTTATGGAGCCCCTGCATCAAAGTGGAAGATATTGAAGAATAGAAGGCTACAAAATTGGGGTGGTGTTGTCCATGAGAAGGGCCTTCTACCTCAAATTTTGCCTCCATGGTTAACAAATCTCACGCAAAAAATATATGAAGAATCTGGGCTATTCCCATCAGCACTCAATCATGTTCTTATCAATGAATACCTACCTAACCAAGGCATAATGCCACACCAGGATGGACCTGCCTATTTTCCAGTGGTAGCTATTCTATCACTTGGATCTCCTGTTGTCATGGACTTCACTCCCCATGCAAGATTCAAACAGGATTCCCAAGATGATGTTTGCAAAGATTCAGATGGAGGAACTTTTGAGATTGGGAAAGATAAGTGGCTTGATGATAACCATCCATTCTCCATTTTATTGATGCCTCGCAGCTTACTGATATTCAAGGACAAGGCATACTCAGATTACTTGCATGGTATAAAAGATTGTGCAGTACATTGCTATGATGGGGCTGTAAATGAAGCTGAAGCTTTGAAACACAAGGAATCAGATGGAAACTTGTTTAGCTCAGAGGATGATGAATTGGAAACAATAGGAAAGGGGGAATATAAGAATATATCAAGAAAATCCACTAGAATTTCATTGACTTGTCGATTGGTACCGAAAGTTCACAAAAATTTGTTTAGTCTGAAAGCATCAACTGAGATTCCACCAACGAACGGCACTCGACGGTTTTTTCGAGTTGGTTATATAAATACGTTCACACCGTCGCGTCCATTTCGTTTTCCAATCTCTCactctcttctccaatcccatttcagGCAAAATTTGCCTTTGAAGGAATCAAAAACTGAGATACGAGCTGATCACATAGGAGTATCCAGTACTCTCTCAGATTTCATGCCTGCCATGAAAAAGAATCCTGAGCTAACTTGTATTGGTTCTGTATTCAACATGTTGGGGAAGGAGCTTGGAGAACCTGTAGACTTTGAACTTCCAGATTCATTTAATAAATCCAAGCCAATGCAGTACACCTATATAAAACGCAATATATATCTCACTAAGAAGGTCAAGAGATCCCGGTTTGATGATGATGGCATATTCTGTTCCTGTACTCCTTCCCCTGGATCTACTAGTGTATGTGGTAGAGATTGCCACTGTGGAATGCTTCTGTCTAGCTGTTCATCAGGCTGTAAATGTGGGAGCTCCTGTCTCAACAAACCATTTCAGAACCGTCCTGTGAAAAAAATGAAATTGGTCAAGACCGAGAAATGTGGTTCTGGAATTGTGGCGGATGAAGATATCAAGCTTGGGGAGTTTGTCATTGAATATGTTGGAGAAGTCATTGATGACAAAACATGCGAGGAAAGGCTTTGGAACATGAAACATAGTGGGGAAACAAACTTCTACTTATGTGAAATCAATCGAGATATGGTGATAGATGCAACATACAAGGGAAACAAATCAAGATACATCAATCATAGTTGCTGCCCCAATACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTTGCAACTCGTGACATACAAAAGGGCGAGCATCTGACTTATGATTACCAGTTTGTTCAATTTGGTGCAGATCAAGATTGCCACTGTGGTGCTGCTGAGTGTAGGCGTAAGTTGGGTGTCCGACCTACCAAGTCTAAACTTTCTTCAGATGCTGCATTAAAATTAGTTGCATATCAGGTGGCTTCATCTTCTCGTAAAAATTCTCGAAGTTCTCGTGTTGTTGACCAACCAAAGTGCTTGCACAATTGCATTGGTGAAGTTATTAGGATAAAACATCTTGAAAATGAGAGGTTTGGAATTATTAAACGATTTGATAAGTATTCCCGAAAACATTCGATCATTGTTGCAACTGTTGGGTGCAGGTGA 2142 0.4052 MNFVRNCVKLCILRFIHLPNSNDHLLTVVSLRRCHHTSGIPNRVMEEKVKLAHYKVGSLPTLFYVPDFITDSDQSLLLNNIYGAPASKWKILKNRRLQNWGGVVHEKGLLPQILPPWLTNLTQKIYEESGLFPSALNHVLINEYLPNQGIMPHQDGPAYFPVVAILSLGSPVVMDFTPHARFKQDSQDDVCKDSDGGTFEIGKDKWLDDNHPFSILLMPRSLLIFKDKAYSDYLHGIKDCAVHCYDGAVNEAEALKHKESDGNLFSSEDDELETIGKGEYKNISRKSTRISLTCRLVPKVHKNLFSLKASTEIPPTNGTRRFFRVGYINTFTPSRPFRFPISHSLLQSHFRQNLPLKESKTEIRADHIGVSSTLSDFMPAMKKNPELTCIGSVFNMLGKELGEPVDFELPDSFNKSKPMQYTYIKRNIYLTKKVKRSRFDDDGIFCSCTPSPGSTSVCGRDCHCGMLLSSCSSGCKCGSSCLNKPFQNRPVKKMKLVKTEKCGSGIVADEDIKLGEFVIEYVGEVIDDKTCEERLWNMKHSGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIQKGEHLTYDYQFVQFGADQDCHCGAAECRRKLGVRPTKSKLSSDAALKLVAYQVASSSRKNSRSSRVVDQPKCLHNCIGEVIRIKHLENERFGIIKRFDKYSRKHSIIVATVGCR 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01692 713 Gene3D - 52 303 IPR037151 -
Gma16g01692 713 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 135 298 IPR005123 -
Gma16g01692 713 PANTHER SET DOMAIN PROTEINS 377 661 - -
Gma16g01692 713 Pfam 2OG-Fe(II) oxygenase superfamily 112 295 IPR027450 -
Gma16g01692 713 ProSiteProfiles SET domain profile. 492 609 IPR001214 GO:0005515
Gma16g01692 713 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 414 670 IPR025787 -
Gma16g01692 713 SMART PostSET_3 615 631 IPR003616 -
Gma16g01692 713 SUPERFAMILY SET domain 402 621 IPR046341 -
Gma16g01692 713 ProSiteProfiles Post-SET domain profile. 615 631 IPR003616 -
Gma16g01692 713 SMART set_7 492 615 IPR001214 GO:0005515
Gma16g01692 713 SUPERFAMILY Clavaminate synthase-like 60 298 - -
Gma16g01692 713 Gene3D SET domain 408 647 IPR046341 -
Gma16g01692 713 Pfam SET domain 503 608 IPR001214 GO:0005515
Gma16g01692 713 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 377 661 - -
Gma16g01692 713 ProSiteProfiles AWS domain profile. 441 490 IPR006560 GO:0005634|GO:0018024
Gma16g01692 713 CDD SET_ASHR3-like 493 631 - -
Gma16g01692 713 SMART shorttest3 441 491 IPR006560 GO:0005634|GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01692 Gma-Chr16 37870238 37887818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01692 465 627 C2H2 Transcription Factor Family AT2G23740 34.973 1.71e-22 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma16g01692 2OG-FeII_Oxy_2 2.2e-11 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01692 - - gmx:100794521 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01692 16 37870238 37887818 Gma09g01495 09 39708246 39718052 GST