Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01689 ATGGAGGTTCCATCACTTTGTGCTAGTGGCTGTGGCTTCTACGGTTCTTCTGCCAACAAGAACCTTTGTTCAAAGTGTTACAAAGATTATCTCAAAGTCACCAAATCAAATGAGTGTGAAACCAAGAACTTGAATGACCAAGTTTTTGTTCTTGATCAGTCATCAACTTCTGAAGATTCTAACACTGATGCTATGGTTGATGTTACTCTCACCGACGCTGAGGGAATGAACAACAAGCGAAAGAGGTGCAAGTGCTGCAACAAAAAGGTTGGGCTATTAGGGTTTGGATGCCGTTGTGGGGATGTGTTTTGTGGAACACATAGATACCCGGAGAAGCATGCATGCAAAGTGGATTTAAAGGAAATTGGTCGTCAAGGTCCCACCAGGTTGCATAACAAGCAACCAAGGATGAATGGTCTCATGCTGGGGAAATCCACCCAGAAGCATGTCGGGTTGCAACTTATTCAAGGAAAAATCAGATAG 483 0.4348 MEVPSLCASGCGFYGSSANKNLCSKCYKDYLKVTKSNECETKNLNDQVFVLDQSSTSEDSNTDAMVDVTLTDAEGMNNKRKRCKCCNKKVGLLGFGCRCGDVFCGTHRYPEKHACKVDLKEIGRQGPTRLHNKQPRMNGLMLGKSTQKHVGLQLIQGKIR 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01689 160 ProSiteProfiles Zinc finger A20-type profile. 1 35 IPR002653 GO:0003677|GO:0008270
Gma16g01689 160 Pfam AN1-like Zinc finger 83 117 IPR000058 GO:0008270
Gma16g01689 160 ProSiteProfiles Zinc finger AN1-type profile. 77 123 IPR000058 GO:0008270
Gma16g01689 160 Pfam A20-like zinc finger 5 28 IPR002653 GO:0003677|GO:0008270
Gma16g01689 160 PANTHER AN1-TYPE ZINC FINGER PROTEIN 4 126 - -
Gma16g01689 160 SUPERFAMILY AN1-like Zinc finger 72 125 IPR035896 -
Gma16g01689 160 SMART A20_3 4 28 IPR002653 GO:0003677|GO:0008270
Gma16g01689 160 Gene3D - 58 128 IPR035896 -
Gma16g01689 160 SMART AN1_Zf_4 83 120 IPR000058 GO:0008270
Gma16g01689 160 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 4 126 - -
Gma16g01689 160 Gene3D - 1 57 - -
Gma16g01689 160 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01689 Gma-Chr16 37853515 37855243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01689 6 125 C2H2 Transcription Factor Family AT3G52800 35.000 9.87e-21 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01689 - - gmx:102663114 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01689 16 37853515 37855243 Gma16g01689 16 37853515 37855243 ECH