Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01681 ATGGAGTGCAATAAGGATGAGGCTACCAGAGCTAAAGAAATTTCTGAGAGGAAGTTTGCTGCAAAGGATACATTGGGTGCAAAGAAATTTGCTTTGAAGGCCCTAAATTTATTTCCTGATCTTGAGGGTATTTCTCAAATGGTAGCAACACTTGATGTGTATATTGCTGCTGCGAATAAAACAAATGGAGAAGCAGATTGGTACGGTGTGCTTGGTGTGGACCCTCTTGCTGACGATGATACAGTCAGGAAACAATACAGGAAGTTAGCTCTCCAACTTCACCCTGATAAGAACAAGTCCATTGGAGCtgatggggcctttaaactcatctcggaggcatggagtttactatcagataaggctaaaaggggagcgtatgataagaGAAGTGGAAGAGAACGGAAAGTTTCTACTAAGTTTGGAGGTTCATCATCACAAAAAGGGACTAATGGTGGTTTcaatttcactaagactgccccttcacgtgcaactcctcagaagaatactgcaaaagaccacacttcatcttctacttataagtcaaaatcaaatacattttggactgtttgccgtcgatgtaaaatgcagtatgagtatcttagagtttatcttaaccttaaactcttatgtcccaactgccatgaggcatttgtggctgtagaaactgctcctccaCCTGCAAGTGGTATTAGACCTGCTACTCAATGGAGTTTTCCACACAAGCAAAATTCCAGCCGCCAATCTAATAAAAGCAAATCTAATGCTGGAAAGAATAACATGGCAGCCCCAAATGTTGGAGGAGGGTCTTGTAGTAAGACTGACTCCTATGAAAAAGCCAATTTCCAGTGGGCTCCATTCTCAAAAGCATCTGGTGTTTCTAATGTTGCTCAAGCTGCAAGTGTGGTTCAGCAGGTATATGATAAGGTGAAGCGAGATCGTGAAGAGGCACAAGCAGCTAGCAAAAGGGAAGAGGCCTTAAAAAGGAAGCAACATGCTACTAAAAAGGGTTACTATAATCCTGCTAAGAGAAGAAGAGGAGGGGGCATGGAGGATGCTAGTGCAAGTAACCATGGTAAGAAAACAAACTTATCCAGATCTAAACAGGGTAATTTTGAATATAATAGCGTTAATGGAATCAACAAGACTGGCCATGTGGGAGATATCTCCCCAGTTCAACTGAAGAATCTTCTTATGGAAAAAGCTAGAAAAGAAATTAGCAATAAACTCAGGCAAGTTCAGTCAAATGCTGTTGATAAAACTGCGATGAAAGAGAATGGAAATGACTTCCAAGAAGTGAGTGAGAAAGGAGAAAAATGTTCAAGAAACTCTGAGATGTGTGCTCAAGATAACATTGAGAAGTCAGAAGATAGAAAGAGCGGATCCCGAGCCATCAAGCCATTTGCAGGTACTACAATTGCTAAAGTTAGCAGAAAATTTTTGGAAACAACACCTGTAGATGTACTAGATCCTGATTTCCATGATTTTTGCAAAGATCGAACTGAAGGATCTTTTGGTGAAAATCAAGTATGGGCCGTGTATGATAACGATGATGGGATGCCTCGATTTTATGCGATGATTCACCGCATCATCTCCCTGAATCCGTTCAAGATGCAGATCAGTTGGCTCAACCCAAATACCAACAGTGAACTGGACCCCCTAAATTGGGTTGCTTCAGGCTTTTCAAAAATTTGTGGGGATTTCAGAACAAGCAGACCTGAAATTTGTGGTTCAACCAATTTTTTCTCCCACAAGGTTAGGTGGAGAACAGGTGCTGATGGAGCCATTTGTATATATCCGAGGAAAGGCGATGTTTGGGCCATATACAGGAACTGGTCTCCTGACTGGAATGAGCTAACTGCAGATGAGGTTATACACAAGTTTGATGTGGTTGAAGTACTTGAGGATTTTACTGTAGGGCATGGTATAGATGTTATTCCTCTGGTCAAAGTGGCTGGATTCAGGACAGTGTTTCACCACCACTTAGATCCAAAAGAAATTAGGATCATTCCGAGGGAAGAGATGTTTCGATTCTCTCATCAAATACCTTCATATGTACTCACTGGTCAAGAAGCTCCAGAGGCTCCAAAGGGTTGCAGGGTGCTGGATCCAGCTGCTACTCCATTTGAACTTCTTCAGGTAATAGAAGTTGTGAAGAAGGGAGACGGGGCAGACAATGAAGATAGTGATGTTAAAAAGACAAGTGATGACATGAAAAAAGATAACAATGACCAAATGATCGATGCTATGGGAAAACAtggggaagaaaaggaggcaaaggacgaagagatgcaggaagtagaaacaagtgatagcatgaaaaagccaataatgaggaaatga 2340 0.3496 MECNKDEATRAKEISERKFAAKDTLGAKKFALKALNLFPDLEGISQMVATLDVYIAAANKTNGEADWYGVLGVDPLADDDTVRKQYRKLALQLHPDKNKSIGADGAFKLISEAWSLLSDKAKRGAYDKRSGRERKVSTKFGGSSSQKGTNGGFNFTKTAPSRATPQKNTAKDHTSSSTYKSKSNTFWTVCRRCKMQYEYLRVYLNLKLLCPNCHEAFVAVETAPPPASGIRPATQWSFPHKQNSSRQSNKSKSNAGKNNMAAPNVGGGSCSKTDSYEKANFQWAPFSKASGVSNVAQAASVVQQVYDKVKRDREEAQAASKREEALKRKQHATKKGYYNPAKRRRGGGMEDASASNHGKKTNLSRSKQGNFEYNSVNGINKTGHVGDISPVQLKNLLMEKARKEISNKLRQVQSNAVDKTAMKENGNDFQEVSEKGEKCSRNSEMCAQDNIEKSEDRKSGSRAIKPFAGTTIAKVSRKFLETTPVDVLDPDFHDFCKDRTEGSFGENQVWAVYDNDDGMPRFYAMIHRIISLNPFKMQISWLNPNTNSELDPLNWVASGFSKICGDFRTSRPEICGSTNFFSHKVRWRTGADGAICIYPRKGDVWAIYRNWSPDWNELTADEVIHKFDVVEVLEDFTVGHGIDVIPLVKVAGFRTVFHHHLDPKEIRIIPREEMFRFSHQIPSYVLTGQEAPEAPKGCRVLDPAATPFELLQVIEVVKKGDGADNEDSDVKKTSDDMKKDNNDQMIDAMGKHGEEKEAKDEEMQEVETSDSMKKPIMRK 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01681 779 MobiDBLite consensus disorder prediction 722 779 - -
Gma16g01681 779 PRINTS DnaJ domain signature 68 86 IPR001623 -
Gma16g01681 779 PRINTS DnaJ domain signature 86 101 IPR001623 -
Gma16g01681 779 PRINTS DnaJ domain signature 102 122 IPR001623 -
Gma16g01681 779 PRINTS DnaJ domain signature 133 152 IPR001623 -
Gma16g01681 779 MobiDBLite consensus disorder prediction 313 371 - -
Gma16g01681 779 Pfam Domain of unknown function (DUF3444) 484 690 IPR024593 -
Gma16g01681 779 PANTHER BNAC03G44070D PROTEIN 1 712 - -
Gma16g01681 779 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Gma16g01681 779 SUPERFAMILY Chaperone J-domain 63 126 IPR036869 -
Gma16g01681 779 MobiDBLite consensus disorder prediction 235 269 - -
Gma16g01681 779 MobiDBLite consensus disorder prediction 313 331 - -
Gma16g01681 779 Pfam DnaJ domain 66 127 IPR001623 -
Gma16g01681 779 MobiDBLite consensus disorder prediction 226 269 - -
Gma16g01681 779 SMART dnaj_3 65 122 IPR001623 -
Gma16g01681 779 MobiDBLite consensus disorder prediction 127 180 - -
Gma16g01681 779 CDD DnaJ 66 119 IPR001623 -
Gma16g01681 779 MobiDBLite consensus disorder prediction 355 371 - -
Gma16g01681 779 Coils Coil 306 329 - -
Gma16g01681 779 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Gma16g01681 779 Gene3D DnaJ domain 63 182 IPR036869 -
Gma16g01681 779 PANTHER BNAA04G14940D PROTEIN 1 712 - -
Gma16g01681 779 MobiDBLite consensus disorder prediction 137 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01681 Gma-Chr16 37821130 37824262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01681 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.051 3.62e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01681 - - gmx:102661977 1521.91