Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01675 ATGGCTTCCCTTGCAGCATCCACTGCTGCTGCTTCCCTTGGCATGTCAGAAATGCTTGGAAACCCCATCAACCTCAGTGGTGCCACAAGGCCAGCTCCATCTGCCTCTAGCCCTGCCTCCTTCAAGACTGTGGCTCTTTTctccaaaaagaaggctgcacctccaaaaaaagctgcaGCTGCTGCTCCTGCCAATGATGAGCTTGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCTGAGGGTCTCTTGGACCGATCTGAGATCCCAGAGTACTTGACCGGAGAAGTCCCCGGAGACTATGGTTATGACCCATTTGGTCTTAGCAAGAAGCCAGAAGATTTTTCCAAATATCAGGCATTTGAATTGATTCACGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCCGAGGCCTTCAACAAATATGGAGCAAACTGCGGTCCTGAGGCTGTTTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGGGGTACCTTGAACTACTTCGGGAAACCCATCCCCATCAATCTTATTGTGGCTGTCATTGCTGAGATTGTTCTTGTGGGAGGTGCAGAGTACTACAGAATTATTAATGGCCTGAATTTCGAAGACAAACTTCatccaggtggtccatttgacccattggggcttgcaaatgatccagaccaagctgcactgctaaaggtgaaggaaattaaaaatggaagacttgctatgtttgccatgcttggtttctacttccaagcttatgtcactggagaaggtcctgttgagaaccttgcaaaacatctcagtgacccTTTTGGCAACAACTTGCTCACTGTCATTTCTGGATCTGCTGAGAGAGCTCCAACTCTCTAA 870 0.3678 MASLAASTAAASLGMSEMLGNPINLSGATRPAPSASSPASFKTVALFSKKKAAPPKKAAAAAPANDELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVIAEIVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGSAERAPTL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01675 289 Pfam Chlorophyll A-B binding protein 91 252 IPR022796 -
Gma16g01675 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 289 IPR001344 GO:0009765|GO:0016020
Gma16g01675 289 SUPERFAMILY Chlorophyll a-b binding protein 70 279 - -
Gma16g01675 289 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 289 - -
Gma16g01675 289 Gene3D Chlorophyll a/b binding protein domain 78 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01675 Gma-Chr16 37785942 37789010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01675 11 289 Chloroplast and Mitochondria Gene Families AT4G10340 81.786 1.18e-152 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01675 K08916 - gmx:100789786 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01675 16 37785942 37789010 Gma16g01675 16 37785942 37789010 ECH
Gma16g01675 16 37785942 37789010 Gma09g01479 09 39516828 39519447 GST
Gma16g01675 16 37785942 37789010 Gma10g01727 10 44434830 44437659 PCT
Gma10g01727 10 44434830 44437659 Gma16g01675 16 37785942 37789010 PCT