Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01674 ATGGCTTGTTCAGTGCATCTACTTCTTCTTCTTCTCACTTCACTTCTGGCTTTGTTCTTTAACCCAACATGTGTCTATGGCAATGATGAGCTTAGAGCACTTTTGGACTTGAAATCAAGTTTGGATCCAGAAGGGCACTTTCTATCCTCATGGACCATGGGTGGTAACCCATGTGATGGTTCCTTTGAGGGAGTGGCTTGCAATGAGAAGGGTCAGGTGGCAAATGTGTCTTTGCAGGGAAAAGGCCTCTCTGGGAAGCTCTCACCAGCTATTGCTGGACTCAAACACTTGACAGGACTCTACTTGCACTACAACTCTTTGTATGGAGAGATTCCGAGGGAAGTTGCTAACTTGACTGAGCTTAGTGACTTGTACTTGAATGTGAATCACTTGTCTGGTGAAATCCCACCTGAGATTGGCAAGATGGAGAATCTGCAAGTTTTGCAGCTTTGCTATAATCAGTTAACCGGAAGCATACCTACACAGCTTGGTGATTTGAAGAAGCTTAGTGTTCTTGCTCTTCAGTCAAACCTGCTGGGTGGAGCTATCCCTGCTAGTCTAGGTGATTTGGGAATGTTGATGAGGCTAGATTTGAGCTCCAATAATCTCTTTGGTTCCATTCCCATTAAACTAGCTGATCTTCCTTCACTGCAAGTTCTGGATGTTCACAATAATACTCTCTCGGGGAATGTACCTCCTGCTCTAAAGAGACTAGAGGAAGGATTTGTGTTTGAACATAATATGGGGTTATGTGGCGTTGGGTTTTCATCCTTGAAAGCTTGCACTGCTTCAGATCATGTCAATCTCACTCGACCAGAACCTTATGGAGCTGGAGTTGGTGGTCTTTCTAGAGATATCCCAGAAACTGCTAATGTAAAGTTGCCTTGCAATACAACTCATTGCCAAAATTCATCAAAATCCAAACAAGCGACATCTATCACAGTTGGCATTGTTCTACTAACAATTGCAGTATCAGCAATTGGTATTTTGACCTTCACTGTGTATCGTCGGCGGAAACAAAAGCTTGGAAGCACATTTGATATCTCTGAAGGCTGTCTAAGTACAGATCAAGCCAAGAGTATATACAGGAAAAATGGATCTCCTTTGGTCAGCCTTGAGTACTCTAATGGATGGGACCCTTTGGCTGACAGCAAGAATTTCAGCGGGGATAGGCAAGACATGTTCCAGAGTTTCAGGTTCAACTTGGAAGAAATGGAGTCAGCTACTCAGTATTTCTCCGAGTTGAATTTGTTGGGGAAGAGCAACTTTAGTGCAACGTATAAAGGAGTTCTAAGAGATGGATCTGTTGTTGCTGTCAAGAGTATCAGTAAAACTAGTTGCAAATCGGATGAAGCTGAATTTTTGAAGGGATTGAACATCTTGACCTCACTGAGGAATGAGAATTTAGTGAGGCTGAGAGGATTTTGTTGTTCAAGGGGACGAGGTGAATGCTTCCTGGTTTATGATTTTGTTTCTAATGGAAATCTGACACGCTACCTTGATGTGAAGGAAGGTGATGGAGAAGTCCTTGAATGGTCAACAAGAGTTTCTATTGTGAAAGGGATTGCTAAAGGTATAGCATATTTACATGCATACAAAGCAAACAAACCAGCTCTTGTTCACCAAAGCATCTCAGCTGAGAAAGTGCTCATTGATCAGCGGTACAACCCATTGCTTTCAGATTCCGGCCTGTACAAGCTTCTTACCAATGATGTTGTCTTCTCCGCGCTAAAGGGTAGCGCAGCAAAGGGCTACCTAGCTCCAGAATACACCACTACCGgccggttcactgagaaaagtgatgtttatgcatttggagtccttcttttccagatcctcacggggaagcAGAAGATCACAAGTGCAATGCGCCTTGCTGCTGAGTCCTTCAAATTCCCAGAATTTATTGATCCTAACTTGCGTGGCAAGTTCTTCGAATACGAGGCGGCTAAACTAGCAAGAATGGCCTTACTTTGCTCCCATGAGTCTCCATTTGAAAGGCCGAGCATGGAAGCCATTGTTCAAGAACTGGGAAATTGTAGTAGCTGTCTTTAA 2055 0.4195 MACSVHLLLLLLTSLLALFFNPTCVYGNDELRALLDLKSSLDPEGHFLSSWTMGGNPCDGSFEGVACNEKGQVANVSLQGKGLSGKLSPAIAGLKHLTGLYLHYNSLYGEIPREVANLTELSDLYLNVNHLSGEIPPEIGKMENLQVLQLCYNQLTGSIPTQLGDLKKLSVLALQSNLLGGAIPASLGDLGMLMRLDLSSNNLFGSIPIKLADLPSLQVLDVHNNTLSGNVPPALKRLEEGFVFEHNMGLCGVGFSSLKACTASDHVNLTRPEPYGAGVGGLSRDIPETANVKLPCNTTHCQNSSKSKQATSITVGIVLLTIAVSAIGILTFTVYRRRKQKLGSTFDISEGCLSTDQAKSIYRKNGSPLVSLEYSNGWDPLADSKNFSGDRQDMFQSFRFNLEEMESATQYFSELNLLGKSNFSATYKGVLRDGSVVAVKSISKTSCKSDEAEFLKGLNILTSLRNENLVRLRGFCCSRGRGECFLVYDFVSNGNLTRYLDVKEGDGEVLEWSTRVSIVKGIAKGIAYLHAYKANKPALVHQSISAEKVLIDQRYNPLLSDSGLYKLLTNDVVFSALKGSAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQILTGKQKITSAMRLAAESFKFPEFIDPNLRGKFFEYEAAKLARMALLCSHESPFERPSMEAIVQELGNCSSCL 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01674 684 Gene3D Ribonuclease Inhibitor 144 262 IPR032675 -
Gma16g01674 684 SUPERFAMILY Protein kinase-like (PK-like) 390 677 IPR011009 -
Gma16g01674 684 ProSiteProfiles Protein kinase domain profile. 412 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01674 684 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Gma16g01674 684 Gene3D Phosphorylase Kinase; domain 1 382 490 - -
Gma16g01674 684 Pfam Protein tyrosine and serine/threonine kinase 416 677 IPR001245 GO:0004672|GO:0006468
Gma16g01674 684 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 7 682 - -
Gma16g01674 684 SUPERFAMILY L domain-like 25 237 - -
Gma16g01674 684 Gene3D Ribonuclease Inhibitor 29 142 IPR032675 -
Gma16g01674 684 Gene3D Transferase(Phosphotransferase) domain 1 491 683 - -
Gma16g01674 684 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01674 Gma-Chr16 37771375 37774952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01674 8 525 Miscellaneous Gene Families AT4G22730 56.792 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Gma16g01674 PK_Tyr_Ser-Thr 5.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01674 - - gmx:100789253 1338.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01674 16 37771375 37774952 Gma09g01478 09 39497316 39500795 GST
Gma16g01674 16 37771375 37774952 Gma10g01728 10 44448959 44451696 PCT
Gma10g01728 10 44448959 44451696 Gma16g01674 16 37771375 37774952 PCT