Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01666 ATGGAGGAAAGAGAGATTTTTAGTTCTGGGCATGCTGTTAATCTTCTCGAGGCCCCCCATAGCTTCCACGTGGCACTAAACTCCGTGCAGTTTTCCGGGCCCACAGTGGAGAcaccggcaccagcaccagcaccggcaccggcaccagcaccggcaccggtaccggTGATTGCTCCGGTGATGAATTCAGGTAGTACGGAGGGGAAGAAGAAGAGGGGCAGGCCTAGGAAGTATGGACCGGATGGCAAGGTGGCGCTGTCACCGATGCCGATATCGGCGTCGATTCCGTTCACCGGAGACTTCTCAGCCTGGAAAAGGGGCAGAGGGAAGCCACTTGAATCAATCAAGAAGACTTTTAAGTTTTATGAAGCTGGAGGTGCAGGATCTGGTGATGGAATTGCATACTCGGTTGGTGCCAATTTCACACCTCACATCCTTACAGTAAATGATGGCGAGGACGTTACTATGAAGATTATGTCCTTCTCTCAACAAGGATATCGAGCAATTTGCATTCTGTCTGCAAATGGCACAATTTCAAATGTTACACTACGCCAACCAACTTCTTCTGGTGGTACTTTAACATATGAGGGGCGGTTTGAAATTCTTTCCTTGTCTGGTTCATATATAACAACTGAGAATGGATTAACAAAGAGCAGATCTGGTGGTATGAGCATCTCTTTGGCCGGTCCAGATGGTCGAGTAATGGGGGGTGGATTGGCTGGTTTGCTGGTAGCTGCAGGTCCTGTGCAGGTTGTTGTGGCTAGTTTTCTTCCTGGTCATCAGCTGGAGCAGCAGAAACCGAAGAAGCCAAGGGTGGAGCATATAATATCAATGGCTGCCCCTATGCATGTCAACCCTACTTCAGCTGCTGAAGAAATAAGAATTGGTCTTGGTGGAGTAAAGCCAATCATGACACCAGCTGCTTTTCAAGTGGACCACATTTTTGGCAATGGCCAAAGCTCTGGGAACTCAGCTTCTGATGATTCAGCCTCTTTCCCTGAAAATGAGTCCAACCCCAGCCATGCAGATGCTGGAGTTGCATGCTAA 1047 0.4556 MEEREIFSSGHAVNLLEAPHSFHVALNSVQFSGPTVETPAPAPAPAPAPAPAPVPVIAPVMNSGSTEGKKKRGRPRKYGPDGKVALSPMPISASIPFTGDFSAWKRGRGKPLESIKKTFKFYEAGGAGSGDGIAYSVGANFTPHILTVNDGEDVTMKIMSFSQQGYRAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSYITTENGLTKSRSGGMSISLAGPDGRVMGGGLAGLLVAAGPVQVVVASFLPGHQLEQQKPKKPRVEHIISMAAPMHVNPTSAAEEIRIGLGGVKPIMTPAAFQVDHIFGNGQSSGNSASDDSASFPENESNPSHADAGVAC 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01666 348 Gene3D - 143 276 - -
Gma16g01666 348 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 336 IPR039605 GO:0003680
Gma16g01666 348 MobiDBLite consensus disorder prediction 314 348 - -
Gma16g01666 348 MobiDBLite consensus disorder prediction 314 338 - -
Gma16g01666 348 ProSiteProfiles PPC domain profile profile. 138 282 IPR005175 -
Gma16g01666 348 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 7 336 - -
Gma16g01666 348 MobiDBLite consensus disorder prediction 60 83 - -
Gma16g01666 348 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 260 - -
Gma16g01666 348 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 256 IPR005175 -
Gma16g01666 348 CDD DUF296 142 256 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01666 Gma-Chr16 37694387 37699603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01666 62 272 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 62.946 1.36e-86 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01666 - - gmx:100803208 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01666 16 37694387 37699603 Gma09g01470 09 39377744 39382668 GST
Gma16g01666 16 37694387 37699603 Gma10g01734 10 44503251 44510813 PCT
Gma10g01734 10 44503251 44510813 Gma16g01666 16 37694387 37699603 PCT