Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01657 ATGGAAGTTGCGTTGTTGTTGGCTTTTGTAGGCAAGTTGAGAAGGCACTTTTTGTTGCTTGTTGTGGGTATGGTGCTTGTGCTGTTCCTCTCTCCGTTTGTTTCACCTCTTGGTGATGAAGGACAAGCATTGATGAAGATTAAGTCTTCATTCAGCAATGTGGCAGATGTTCTGCATGATTGGGATGCTTTGCATAATGATGACTTCTGTTCCTGGCGCGGAGTCTTGTGCGACAATGTCAGCCTTTCTGTGCTTTTTCTGAATTTGTCAAGCTTGAATCTTGGTGGGGAGATATCACCAGCCATTGGTGACTTAGTAAACTTGCAATCCATAGACCTGCAGGGAAATAAACTAACTGGTCAAATTCCAGATGAAATTGGAAACTGTGCTGAGCTTATTTATCTGGATTTGTCTGATAATCAACTATATGGTGATATACCTTTCTCCATATCAAACCTAAAGCAGCTTGTGTTTCTGAATTTAAAGAGTAATCAGTTGACTGGTCCTATCCCCTCAACATTAACCCAAATTTCAAACTTGAAGACTCTTGATCTTGCACGAAATAGACTCACTGGTGAGATTCCTAGACTGCTCTATTGGAATGAAGTCTTGCAGTACCTGGGGTTGCGAGGTAACATGTTGAGTGGAACTCTGTCCTCTGATATCTGTCAATTGACTGGTTTGTGGTATTTTGACGTGAGAGGCAATAATTTGACTGGCACCATACCTGACAGCATTGGAAACTGTACAAATTTTGCAATCTTGGATCTTTCATACAATCAAATTTCTGGGGAGATTCCCTATAATATTGGATTTCTTCAAGTAGCTACTTTGTCGCTTCAAGGAAATAGACTAACTGGGAAGATTCCAGAAGTCATTGGTTTAATGCAAGCACTTGCCATTTTGGATTTGAGTGACAATGAGCTAATAGGACCCATTCCTCCCATACTAGGCAATTTGTCTTATACTGGAAAGCTGTACCTTCATGGAAACATGCTTACTGGACCAATACCTCCCGAACTTGGCAATATGTCAAGACTAAGCTACCTGCAATTGAATGACAATCAGTTAGTAGGCCAAATTCCTGATGAACTTGGGAAGCTTGAACATTTGTTTGAATTGAATCTAGCCAATAATCATCTTGAAGGATCTATTCCACTTAACATTAGCTCATGCACTGCCTTGAATAAGTTTAATGTGCATGGAAATCATTTAAGTGGTTCAATTCCTTTGAGCTTTAGCAGGCTTGAGAGCTTGACTTATTTAAATCTTTCTGCAAACAACTTCAAAGGGAGTATACCTGTTGAGTTGGGCCATATAATAAATCTTGACACGCTGGATCTATCTAGCAATAATTTTTCAGGGCATGTTCCAGGGTCAGTTGGTTATCTTGAGCATCTTCTGACCTTGAACTTGAGCCATAATAGTCTTCAGGGTCCCTTGCCTGCTGAATTTGGAAATCTTAGAAGCATACAGATTATTGATATGTCATTCAACTATCTGTTGGGTAGCGTTCCTCCGGAAATTGGTCAGCTGCAGAATCTTGTGTCTCTGATTTTGAACAACAATGATTTGCGTGGGAAGATTCCAGATCAGCTTACCAATTGCTTAAGTCTTAACTTCCTAAATGTCTCATACAATAACTTATCTGGGGTCATTCCTCTCATGAAGAACTTCTCACGGTTTTCTGCTGACAGCTTCATTGGAAATCCATTATTATGTGGAAATTGGTTAGGATCCATATGTGATCTTTACATGCCAAAATCCAGAGGGGTTTTTTCAAGGGCTGCAATTGTTTGTCTCATTGTTGGTACCATCACATTATTGGCCATGGTAACTATAGCAATCTACAGATCAAGCCAATCAACGCAATTGATTAAAGGATCTAGGCCACCCAAGCTTGTAATTCTTCATATGGGCTTGGCCATCCATACCTTTGATGACATTATGAGAGTTACTGACAATCTCAATGAGAAGTATATTGTAGGGTATGGTGCCTCTAGTACTGTGTACAAGTGTGTTTTAAAGAATTCCCGGCCAATTGCAATTAAACGACTATACAACCAGCATCCACACAGCTCAAGGGAGTTTGAGACAGAACTTGAAACTATTGGCAGTATCAGACACAGGAATCTTGTCACTTTGCATGGTTATGCTCTAACTCCTAATGGAAATCTTCTTTTCTATGACTATATGGAGAATGGCTCTCTGTGGGATCTTCTTCATGGTCCCTCGAAAAAGGTAAAActtgattgggaggcacgcatgaggattgccgtgggaactgctgaaggacttgcttacctccatcatgactgcaatcctagaatcattcacagggatataaagtcctcaaacatcctgctagatgaaaactttgaagctcgtctctctgattttggcattgccaaatgtttgtcaactgcaagaactcatgcgtcaacgtttgttcttggaacaataggctatattgaccctgagtatgcccggacatctaggctgaatgaaaaatccgatgtgtatagctttggcattgttcttcttgagctactaactgggaagaaagcagtggacaatGATTCCAATTTGCATCACTTGATATTATCCAAGGCAGATAACAACACTATAATGGAGACTGTGGATCCTGAGGTGTCTATTACCTGCATGGATCTGACCCATGTTAAGAAGACCTTTCAGCTTGCTCTTCTTTGCACGAAAAAAAATCCTTCCGAGAGGCCAACCATGCATGAGGTTGCCAGGGTTTTGGCATCACTACTCCCAGCACCTCCCAGTAAAAATATCTTCGTCCCTTCTTCAAAGACCATTGATTATGCACAATTTGTGATTCAAAAGGGAAAACAAAACAACCTCCACCCTCTACAAATGGATAGGCTACAACCTCAGCAGTTCTCTAATGATCAATGGGAGCATTTTGCTTACTCTAGTGGTGGCAGGATGTTGTCGTCAAAGGTTTGTCTAATAGGGGTGAGTTCAAACTACGATCTCGTTCATCTCCACGACGATTATGATATCACTAGTTACCAAGTCTCCAACATTCACACTGGTGATGTTGTTGCTAGTGATGTCGTGGTTTTTCCTGACGCAGCCAATTGCCGCCACTTTTCCCGCAACGGTGAAATTGGAAGCGCAAACATGTCTGTTTCTGCGTCACAAACCGAAGAACAAGTCTCAACTAGAAAACCAACAACACTGTGTGAAGAATGCAAATCGAACCCATCGAAATACACGTGCCCTGGTTGCTCCTTACACTCGTGCAGTCTTCCATGCGTGAAGTCTCACAAAGAGCGAACTGGGTGTAGTGGCAAGAGGAACCAGACTCAGTTTCTTCCTCTTTCGAAGTTTGATGACAGTGTCCTGTTATCTGACTATAATTTGCTGGAGGAGGTGAAGAGGGTGGCTGAATCTGCTCAAAGAATGAGAAATAAATTGGGCATTTATGCCTATTTTAAGTTACCTCGTTACCTTAGAAGCCTAAAGAATGCTGCTGGGAGCAGGAGAACCAAACTGATGTTTCTCCCTAATGGAATGTCTAAAAGAGAGAAGAACCGGTCTCAATATGACCAAAGGAAGAAGTTTATATCTTGGACAATTGAATTACATTTTCACTCAACAGATATTGTTTTACTCGACCATGGAGTTGATGAAAATACAAGCTTTTACTCCATTCTAGAGAAGCACCTCATGCCTGGTCCTTGGAAGAATCAGCTAAAGCAATTCTGTGAAGTCCAGCTGGATTGTCTAAAGCTTTTCATTCGTAAATACCCGAAGGGTCCCAAGTCACCTTTCAAAGAGTTGGATATAAAAGCGCCAATCAGACAACAATTAGCAAATATAGTCATTTTGGAGTTTCCTGTTGTTTTTGTTTTCTTGCCATCTCATAGAATCAATTTTGAAGTTATTAAGGATGTCAATACCAGCAAGCATAAATCACTGCAGAAAGATTGTGAAGACAACCAAATCCCTCAAGGTTTATCATTTAGGGAGGAAGTGATAGAAGATGACAACAACTCTGCAGATCCTCAGGTTCTTGATCTCATGAAGCAAGTGGAATCAAGTTTATTGCATGAAGTGATGACCCAAAATATGAGTTCTGAGAAAGCACCAAATGATTCCTCAGAGAAGTCTCTGTTTGAAGGAGCTACTGGGGGTAATCTTTCGCATTCTTTGATGGAAACCAATGAACTAAAATTCTCTGAAGATATGGCATTTGACTTTGATCAGGATTTGATGGATTTCTATACTGATATATTGGATCAGACAAATCCTGGTGATCTTTTTGATTTTGATAGTGAATTTGCCAATAAAGCAGAAAATGAAATTGATTTAATTGGTACTAGTGAATTATTCCCTTTGCCAGAGGAATTGGAGGAAGGGGAAATTTTAGAATAA 4410 0.3726 MEVALLLAFVGKLRRHFLLLVVGMVLVLFLSPFVSPLGDEGQALMKIKSSFSNVADVLHDWDALHNDDFCSWRGVLCDNVSLSVLFLNLSSLNLGGEISPAIGDLVNLQSIDLQGNKLTGQIPDEIGNCAELIYLDLSDNQLYGDIPFSISNLKQLVFLNLKSNQLTGPIPSTLTQISNLKTLDLARNRLTGEIPRLLYWNEVLQYLGLRGNMLSGTLSSDICQLTGLWYFDVRGNNLTGTIPDSIGNCTNFAILDLSYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSDNELIGPIPPILGNLSYTGKLYLHGNMLTGPIPPELGNMSRLSYLQLNDNQLVGQIPDELGKLEHLFELNLANNHLEGSIPLNISSCTALNKFNVHGNHLSGSIPLSFSRLESLTYLNLSANNFKGSIPVELGHIINLDTLDLSSNNFSGHVPGSVGYLEHLLTLNLSHNSLQGPLPAEFGNLRSIQIIDMSFNYLLGSVPPEIGQLQNLVSLILNNNDLRGKIPDQLTNCLSLNFLNVSYNNLSGVIPLMKNFSRFSADSFIGNPLLCGNWLGSICDLYMPKSRGVFSRAAIVCLIVGTITLLAMVTIAIYRSSQSTQLIKGSRPPKLVILHMGLAIHTFDDIMRVTDNLNEKYIVGYGASSTVYKCVLKNSRPIAIKRLYNQHPHSSREFETELETIGSIRHRNLVTLHGYALTPNGNLLFYDYMENGSLWDLLHGPSKKVKLDWEARMRIAVGTAEGLAYLHHDCNPRIIHRDIKSSNILLDENFEARLSDFGIAKCLSTARTHASTFVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNDSNLHHLILSKADNNTIMETVDPEVSITCMDLTHVKKTFQLALLCTKKNPSERPTMHEVARVLASLLPAPPSKNIFVPSSKTIDYAQFVIQKGKQNNLHPLQMDRLQPQQFSNDQWEHFAYSSGGRMLSSKVCLIGVSSNYDLVHLHDDYDITSYQVSNIHTGDVVASDVVVFPDAANCRHFSRNGEIGSANMSVSASQTEEQVSTRKPTTLCEECKSNPSKYTCPGCSLHSCSLPCVKSHKERTGCSGKRNQTQFLPLSKFDDSVLLSDYNLLEEVKRVAESAQRMRNKLGIYAYFKLPRYLRSLKNAAGSRRTKLMFLPNGMSKREKNRSQYDQRKKFISWTIELHFHSTDIVLLDHGVDENTSFYSILEKHLMPGPWKNQLKQFCEVQLDCLKLFIRKYPKGPKSPFKELDIKAPIRQQLANIVILEFPVVFVFLPSHRINFEVIKDVNTSKHKSLQKDCEDNQIPQGLSFREEVIEDDNNSADPQVLDLMKQVESSLLHEVMTQNMSSEKAPNDSSEKSLFEGATGGNLSHSLMETNELKFSEDMAFDFDQDLMDFYTDILDQTNPGDLFDFDSEFANKAENEIDLIGTSELFPLPEELEEGEILE 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01657 1469 Pfam HIT zinc finger 1068 1098 IPR007529 -
Gma16g01657 1469 MobiDBLite consensus disorder prediction 1368 1387 - -
Gma16g01657 1469 SMART LRR_typ_2 368 392 IPR003591 -
Gma16g01657 1469 SMART LRR_typ_2 416 440 IPR003591 -
Gma16g01657 1469 SMART LRR_typ_2 344 367 IPR003591 -
Gma16g01657 1469 SMART LRR_typ_2 464 487 IPR003591 -
Gma16g01657 1469 SMART LRR_typ_2 105 129 IPR003591 -
Gma16g01657 1469 SMART LRR_typ_2 177 201 IPR003591 -
Gma16g01657 1469 SMART LRR_typ_2 225 249 IPR003591 -
Gma16g01657 1469 SMART LRR_typ_2 512 536 IPR003591 -
Gma16g01657 1469 SUPERFAMILY HIT/MYND zinc finger-like 1067 1107 - -
Gma16g01657 1469 Pfam Protein kinase domain 659 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01657 1469 ProSiteProfiles Protein kinase domain profile. 656 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01657 1469 SUPERFAMILY L domain-like 39 334 - -
Gma16g01657 1469 SUPERFAMILY Protein kinase-like (PK-like) 634 922 IPR011009 -
Gma16g01657 1469 SUPERFAMILY L domain-like 319 575 - -
Gma16g01657 1469 Gene3D Ribonuclease Inhibitor 276 584 IPR032675 -
Gma16g01657 1469 Gene3D Transferase(Phosphotransferase) domain 1 732 933 - -
Gma16g01657 1469 ProSiteProfiles Leucine-rich repeat profile. 179 201 IPR001611 GO:0005515
Gma16g01657 1469 Pfam Leucine rich repeat 442 501 IPR001611 GO:0005515
Gma16g01657 1469 Pfam Leucine rich repeat 107 166 IPR001611 GO:0005515
Gma16g01657 1469 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 28 954 - -
Gma16g01657 1469 SMART serkin_6 656 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01657 1469 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 28 954 - -
Gma16g01657 1469 ProSiteProfiles Zinc finger HIT-type profile. 1072 1106 IPR007529 -
Gma16g01657 1469 Gene3D - 1056 1112 - -
Gma16g01657 1469 Gene3D Ribonuclease Inhibitor 38 202 IPR032675 -
Gma16g01657 1469 Gene3D Phosphorylase Kinase; domain 1 618 731 - -
Gma16g01657 1469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Gma16g01657 1469 ProSitePatterns Protein kinases ATP-binding region signature. 662 684 IPR017441 GO:0005524
Gma16g01657 1469 Gene3D Ribonuclease Inhibitor 203 275 IPR032675 -
Gma16g01657 1469 Pfam Leucine rich repeat N-terminal domain 38 78 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01657 Gma-Chr16 37597877 37611672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01657 106 926 Receptor kinase-like Gene Family AT5G07180 78.814 0.0 1326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Gma16g01657 Pkinase 9.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01657 K20718 - gmx:100305433 1906.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01657 16 37597877 37611672 Gma16g01657 16 37597877 37611672 ECH
Gma16g01657 16 37597877 37611672 Gma09g01461 09 39238995 39241667 GST