Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01654 ATGGAGTTGTTTACAAACCATAAACCAATAGCATCCATGGCTTCCTACAAGATTCTCTTCCTCTTCATCCTTCTTAGCTTCCTCAATTTTGCAACTACTGAGGCACAAGATCAAAGCTCCACCCCTCTCTATATATACCATAACTGCTCCGGTGGCAACACCACCGCTAACAGTGCCTTCCAAATAAACGTCAGGACCCTCCTCTCTTCCTTATCTTCAAACGCCCCCGGCGACAACGGATTCTACAACACCACAGTCCCTCCAAAAAACCCCTCAGACTCTGTCTTTGGACTCTTCATGTGCAGGGGTGACGTTCCTCCTCAGCTTTGTCAACAATGCGTCCAAAATGCAACCCAGAGACTACGCTCAATGTGCTCACTGTCCATTCAAGCTGTGATTTGGTACGATGAGTGCACGGTTCGTTATTCCAACCGCTCCTTTTTCTCCACCGTGGACACTAGGCCTAGAGTTGGCCTGTTGAACACTGCCAATATCTCTAACCAGGAAAGTTTCATGCGTTTAATGTTTTCTACAATAAACAAAACTGCAGATGAAGCTGCTAAGGATGACaagaagtttgccacaaggcaaacaaacatatctgaatttcagaacctttattgtctagctcagtgcactccagatttgtcaccccttgattgcagaagctgtctcagtaaagtgataggagacctttcatggtgctgtgaaggaaagcagggagggagagttctatatcccagttgtaatgttaggtatgaattgtaccctttctacCGCTCCACAAATAGAACTAAACCACCAGCGTGGGTTCCTGCAACAAATTTTCCCGATGCGGATTCACAATTTTCAGAAGATCCAACTTATCTAAACCACAGTTGCCCAACCGATGTAACTGTTGACAGCACTTTCCAAATGTATCTCAAGACCCTTCTCTTTTACTTGTCTTCTAATGCCACAAATGGGAAAAAATCTTACAAGGACAACGTAGAGAACACTGTGTATGGCCTCTTCATGTGCCGAGGCGATCTTCCCTCTCAACTCTGCCAACAATGCGTCCTCAACGCAACCCACCGAATATCCTCAGTGTGTAATTCAGTTCAAGAGGGAATCATTTGGTACAGCCACTGCATGATTCGATATTCCAATCTGTATTTCTTCTCAGAAGTGGAAGAAAGTCCAAATTTTGACATGCTGAATCTTACCAGTTCCTCCACCAGCATCATCCCCGGGCAAGACTACTTCACTTTTACATTATCAGATACCATAGTTAAGCTGGCCCAAGAGGCAGGGGATACCACTGAGAGATATGTCACGAAATCATTAAAATTGACTGATTTGCAAACTCTGTATACTCTTGCTCAATGCACGCAGGATTTGTCTAGTGATGGTTGTAAGAACTGTCTGGAGGATATAAATGGAAAAATTCCATGGTTCCGCTTGGGAAGCGTAGGGGGAAGAGTTTTATATCCTAGCTGCAATCTCAGGTTTGAATTGTTCCAATTTTACAGGGGTAGTGATGAAGAAACTCAATCGCCAATGGCGGGTAATCCTTCTACACCAGGCCTTCAAGGTAAAAGAAAAGTCCGATTGCGAACAATAATTTTCATTATTGTACCCACAATTGTTTCTGTGACGCTCTTCTTTCTTGGCTATTATTTGGTAAAGAGAAAAGCAAGAAAGAGTGTTAAGACTATTCTTAGAGAAAATTTTGGTCATGAAAGTGTCACTTtagagccattgcaatttagtttggctgtaattgaagcagcaaccaacaacttttcaaatgataataggatcggcaaaggcgggtttggagaagtttacaagtggttatatgtctccagaatatgcaatgcttggacaattttcagaaaaatcagatgtttttag 1896 0.3492 MELFTNHKPIASMASYKILFLFILLSFLNFATTEAQDQSSTPLYIYHNCSGGNTTANSAFQINVRTLLSSLSSNAPGDNGFYNTTVPPKNPSDSVFGLFMCRGDVPPQLCQQCVQNATQRLRSMCSLSIQAVIWYDECTVRYSNRSFFSTVDTRPRVGLLNTANISNQESFMRLMFSTINKTADEAAKDDKKFATRQTNISEFQNLYCLAQCTPDLSPLDCRSCLSKVIGDLSWCCEGKQGGRVLYPSCNVRYELYPFYRSTNRTKPPAWVPATNFPDADSQFSEDPTYLNHSCPTDVTVDSTFQMYLKTLLFYLSSNATNGKKSYKDNVENTVYGLFMCRGDLPSQLCQQCVLNATHRISSVCNSVQEGIIWYSHCMIRYSNLYFFSEVEESPNFDMLNLTSSSTSIIPGQDYFTFTLSDTIVKLAQEAGDTTERYVTKSLKLTDLQTLYTLAQCTQDLSSDGCKNCLEDINGKIPWFRLGSVGGRVLYPSCNLRFELFQFYRGSDEETQSPMAGNPSTPGLQGKRKVRLRTIIFIIVPTIVSVTLFFLGYYLVKRKARKSVKTILRENFGHESVTLEPLQFSLAVIEAATNNFSNDNRIGKGGFGEVYKWLYVSRICNAWTIFRKIRCF 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01654 631 Pfam Salt stress response/antifungal 166 256 IPR002902 -
Gma16g01654 631 Pfam Salt stress response/antifungal 298 383 IPR002902 -
Gma16g01654 631 Pfam Salt stress response/antifungal 414 498 IPR002902 -
Gma16g01654 631 Pfam Salt stress response/antifungal 49 144 IPR002902 -
Gma16g01654 631 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 30 267 - -
Gma16g01654 631 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 522 611 - -
Gma16g01654 631 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 280 511 - -
Gma16g01654 631 ProSiteProfiles Gnk2-homologous domain profile. 286 386 IPR002902 -
Gma16g01654 631 ProSiteProfiles Gnk2-homologous domain profile. 42 147 IPR002902 -
Gma16g01654 631 SUPERFAMILY Protein kinase-like (PK-like) 570 615 IPR011009 -
Gma16g01654 631 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 30 267 - -
Gma16g01654 631 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 522 611 - -
Gma16g01654 631 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 280 511 - -
Gma16g01654 631 ProSiteProfiles Gnk2-homologous domain profile. 396 502 IPR002902 -
Gma16g01654 631 ProSiteProfiles Gnk2-homologous domain profile. 153 258 IPR002902 -
Gma16g01654 631 Gene3D Phosphorylase Kinase; domain 1 556 618 - -
Gma16g01654 631 Gene3D - 288 386 IPR038408 -
Gma16g01654 631 Gene3D - 398 502 IPR038408 -
Gma16g01654 631 Gene3D - 41 147 IPR038408 -
Gma16g01654 631 Gene3D - 156 258 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01654 Gma-Chr16 37542061 37546779 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01654 284 611 Receptor kinase-like Gene Family AT4G05200 34.483 6.43e-51 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01654 - - gmx:100798426 1225.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01654 16 37542061 37546779 Gma09g01454 09 39102828 39107027 GST