Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01648 ATGCCATCCCGACAATTATCCACCCCATCAGACACACCCCATCCGCTGCCACCGCCACGTCATCACCACCACCACCATCACCACTTTCTGACTCCTCTCCTCGCCGCCACCGTCTCAACATGCTCCCTTTTCCTCCTCCTTCTCCTCTTCTGCCACCGCACCCTCACCCGCAAACGCGCTACCACCTACCCTCCTTCTCCGGCCACCACCTCCCCGCCGCACCGCCTCTCCTTCTCCGTCCTCCGCCGTGCCACCAACTCCTTCTCCACGCGCCTCGGCCACGGAGGCTTCGGCCCCGTCTTCGCCGGCACCCTCGCCGGCGCCCCCGTCGCCGTCAAGCTCATGGACTCCGCCACCAACCACCACCAGGGTGAGCGCGAGTTCCACAACGAACTCTTCTTCGCCTCGAAGCTCCTCTCCCGCCACGTCATCACCGCCACGCACTTCTGCTCCGACCCGAAACGACGCCGCTTCCTCCTGGTCTACGAGCTCATGCACAACGGCAACCTCCAAGACGCGCTTTTGCACCGCAACAACGTTTTGCTTGATCGCGATTTCTCGCCGAGAATTGGGGACTTTGGGCTTGCGAGGTTGAGCTCGGAGACTCCGAGGTTTGAAATTGAGGTTCTGGAATGTGGGAGTGTTGATAATGAAGAGAAGATGAAGAAGAAGGAGGAGGAGGAGGAGGTTGTTGTTGTTGTTGCTGATGATTGTGGATCGGTGGAGAGTGCTCATAGTGTTTTTATGGAGGATGGTGGTTTGGGTGTGGAGCAATCGCCTTCGCCGGAGATGGCGGCGATGACTTCGCCGGAGACGGGTTTGGCGGTGTCCGCCGCTGAGGCCTCGCCGGGGTTTGAGAAGGGTAGTGTGCAGAGTGAGAAGGAGGGTGTGAAGAAGATTAATGGGAGAGGGTTGAAGAGTAATTCTGTGAGGGATTGGTGGTGGAAGCATGAGAATGAGGTTGGGGTTGGGGAGAGTAAAAAAGTTAAGGATTATGTGATGGAGTGGATTGGGAGGGATGTGAATAAGGAAAGGGTGAAAAATGGAATTGAATATGGAGATGTGGTGGTAGGGAAGGAAGAGAAAAATAAGAAGGAGAAGAAGAGAAGGAAGAAGGAATTGGAATGGTGGGAATCAATGGAAGAGGAAAAGCTTGATGGGGTTATGAAGAGGAAGAGAAGGACGGTGAGGGAATGGTGGAAGGAGGAGCGTTTTGAGGAGAATGCGAAGACGACGGCAAAGAAGAAGAAGAAAAAGAGGAAGGGTGGGAGTGTGAAGAGTGATGATGAGAAGTGTGGTGATGATTGGTGGATGAGTGATGATGCAATGGATAAGAGGAAGGGCAAGAGTAGGAGTAGGAACAACCGTGGGAACATGGATTGGTGGATGGATGGGTTGAGTGGTGAGTTATGGAGAGGGAGGAGGAATAATAGCTTTGATTCTGCTAGTGGGGAGATTCCAAAGAGTGGTGGTGTGAGTAGTACTCCTAGTATGAGGGGAACTGTGTGCTATGTTGCTCCTGAGTGTGGCTATGGTGGGGAAGTGTCTGAGAAGTCTGATGTGTATAGCTTTGGGGTGTTGTTGCTTGTGATCATTTCCCGGCGGCGCCCACTTCAGGTCAGCGGTTCGCCCTTGTCTGAGTTTCAGAGGGCGAATCTGCTGTCGTGGGCACGCCATTGCGCACGAAATGGGAAGCTTGTTGAGCTGATTGATGAGTCTACTGAGTTGTTGGATAAGGAGCAAGCTCTTCTCTGCATCAAGGTGGCGTTGCTTTGCTTGCTGAAGTCACCTGCTCGTCGTCCTTCAATTAAGGAGGTTGTGGGAATGCTCAGTGGGGAATTGGAGCCACCCCAATTGCCTGTCGAGTACTCACCTTCAACCCCTTCAAGGTTCCCTTTCAAGTCTAGGAGAAAAGGCAGGACTCAAATTTGTTTACAAGCTGCTGATCTGAGACACTGTAAAAGCTCTGACGTCTTCCCCTGCCACCTCTAA 1992 0.5346 MPSRQLSTPSDTPHPLPPPRHHHHHHHHFLTPLLAATVSTCSLFLLLLLFCHRTLTRKRATTYPPSPATTSPPHRLSFSVLRRATNSFSTRLGHGGFGPVFAGTLAGAPVAVKLMDSATNHHQGEREFHNELFFASKLLSRHVITATHFCSDPKRRRFLLVYELMHNGNLQDALLHRNNVLLDRDFSPRIGDFGLARLSSETPRFEIEVLECGSVDNEEKMKKKEEEEEVVVVVADDCGSVESAHSVFMEDGGLGVEQSPSPEMAAMTSPETGLAVSAAEASPGFEKGSVQSEKEGVKKINGRGLKSNSVRDWWWKHENEVGVGESKKVKDYVMEWIGRDVNKERVKNGIEYGDVVVGKEEKNKKEKKRRKKELEWWESMEEEKLDGVMKRKRRTVREWWKEERFEENAKTTAKKKKKKRKGGSVKSDDEKCGDDWWMSDDAMDKRKGKSRSRNNRGNMDWWMDGLSGELWRGRRNNSFDSASGEIPKSGGVSSTPSMRGTVCYVAPECGYGGEVSEKSDVYSFGVLLLVIISRRRPLQVSGSPLSEFQRANLLSWARHCARNGKLVELIDESTELLDKEQALLCIKVALLCLLKSPARRPSIKEVVGMLSGELEPPQLPVEYSPSTPSRFPFKSRRKGRTQICLQAADLRHCKSSDVFPCHL 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01648 663 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 178 - -
Gma16g01648 663 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 178 640 - -
Gma16g01648 663 MobiDBLite consensus disorder prediction 410 458 - -
Gma16g01648 663 MobiDBLite consensus disorder prediction 1 25 - -
Gma16g01648 663 Pfam Protein tyrosine and serine/threonine kinase 88 176 IPR001245 GO:0004672|GO:0006468
Gma16g01648 663 Pfam Protein tyrosine and serine/threonine kinase 496 608 IPR001245 GO:0004672|GO:0006468
Gma16g01648 663 ProSiteProfiles Protein kinase domain profile. 86 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma16g01648 663 Gene3D Transferase(Phosphotransferase) domain 1 70 189 - -
Gma16g01648 663 MobiDBLite consensus disorder prediction 423 448 - -
Gma16g01648 663 Gene3D Transferase(Phosphotransferase) domain 1 477 617 - -
Gma16g01648 663 SUPERFAMILY Protein kinase-like (PK-like) 65 630 IPR011009 -
Gma16g01648 663 PANTHER OS07G0586332 PROTEIN 1 178 IPR044576 -
Gma16g01648 663 PANTHER OS07G0586332 PROTEIN 178 640 IPR044576 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01648 Gma-Chr16 37466776 37469891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01648 494 632 Receptor kinase-like Gene Family AT4G23190 35.461 4.90e-14 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Gma16g01648 PK_Tyr_Ser-Thr 2.8e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01648 - - gsj:114390604 1183.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01648 16 37466776 37469891 Gma09g01440 09 38741556 38744521 GST
Gma16g01648 16 37466776 37469891 Gma10g02286 10 50464340 50466344 PCT
Gma16g01648 16 37466776 37469891 Gma20g01428 20 41395264 41397441 PCT
Gma10g02286 10 50464340 50466344 Gma16g01648 16 37466776 37469891 PCT
Gma20g01428 20 41395264 41397441 Gma16g01648 16 37466776 37469891 PCT