Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01637 ATGGGCAAGGAGTGGTATTTTGCTGGAAGATCATCTAAGAGAGGTGTAGGAGGAGGTGCTGAGGCTGAAACACAAGCCCCTTCTGGTTGCATGTGTGCTGTTTTTCAGTTCTTTGATTTCCATCCTTTTCACTTTCCCAACATAAACCAACAACACCAACAAGATCAACAAGCCTCTTTTAAGCCACCCTCATGCACCTCAGAAGACCACACCACAGTCTCAAAAGGTGCTGAAGCACCTAGGAACAGCTTAGAGGCAGAGGATGGTGATGGTACAGTTTCATCTCTCTCATCAAAAGAAGATGATTTTAAAATTCCTAAGAATATTATACAAATTAAGACAAGTGGAGCCACAAGAACAAGTGGTGGAAATTTGAATGACTTGTCCTCAGAACTCACCAGCTCTCCAGGGACAAAGACACCAACTTTAGTGGCAAGGTTAATGGGTTTGGATCTTCTTCCAGGTGCAAACTCACCCTCTTTTTCTTCTTCATGTCTTTCAACTCCAAACACACAAGACAATGTGCCACATCTTCACCACCACCTGAGGCACAAGCAACATGTCCAAACCAAGCACAGGAACAGCGTAGATAGTAGTGACATTTCAGCCACAAGATCTTTGCCTGAGACACCAAGAATCTCCTCAGCAAGAAGATCAGATGTTGATCATCACCACAGACTCTCACTCCAAATCATAAAGGAAAACATGAACCTTGGTGAGGATTTGGAGCTCCCTAGGCTCTCATTTTCCAAAAGGAAGAGTGATGAGAACAATGGCAGGAGTCCAAGCCACTATGCCAGGCAAATTGTCAAACAGGCTAAGGAAAGTGTGAGCAGAAAAGTTGGGCAAGACATCACCAACACAACTCTCAAAGCAAGAGAAGAAAATGCAGGCCAATTCAGAAGCAAAAAGTCTCCCAAAACATCATCACTGAAAGCAATTGATGAAACTGAAACCAGCCCAAATAAACACTCAAACCAATCTTCCTACTCCCCAAGGCTTAGATTCATTGACAAACACAAACCAAGCACAACAACAACATCAACAGCACCATCACCACTCACCCCAAAAGATCAAAACATGCTGAAACTACCACCACCTCCTTCTCCAGTTAACACTCACCAACCTCAGCTTCCAAGAGTTTTAACAAAACCAAAGCTTCAAGCAGTGGTGCCAGAACAGAAAGAGTTTCATCAGAACAACAAATCTGTTCCAAAATGCAAAAAGGCTACCAATGAAAAAAAGTTCAACTCAAGGCTCATCAAAAGGCCTCCACAGACATCAGACATCATCAGAAACAAGCAAGAAGAACCATTCATCATTCGTCCCACATCGCCTACTAGAGCCAGTGACATCAAAAACACCAAAAGCAAGAAAAATCATCCATTGTCAAGCAATCTCCTCAACAACATCAGCAATGTACCAAATCTTCTACCTGTCAAGACAGACCCTTCTCCTTCGGCAACCAAAATTCCTTCCAAACAGTCACAGGTCTGTGATAGTCGTCATCAAGAGTCCAAAAGCAGTTCACAGTTATCTAGTTGTGCGCGCCAGAGGTACAAACAAGAAGAAACAACAACCACACTACTCGCTACCCGAGATAACAACGGTGCCTTCTTCTCCTCCTCCACCGTCACCCACCCTCCCACCCCACAAGAGCTTCAGTACATCACAGCAATCCTTGCACGTACCACTGCCCTAAACTCACAGGGTACCCCCACTACAGTTTCCTTAAACCAGCCCCTCGACCCATCAATCTTCCACCACCTCGAACACCCCGCCGGCGACAAAGATCGCAACTTTGCCCCGAAAGACCAACTGGGTCACCGTTGGAATCGGAGATTACTGTTCGATTTGGTTGACGAGGTTCTGAGGGAGATTCTGGAGTCTCAAGAGGGAGAGAGAGAAAAGAGGCTTTGGTTTTTGAAGGGTGGTATTTGTAACCAAAGAGGGAGGAGCGTTGAAGGGTTGGTGAAGAGGGTGTGGAAGAGGGTTGAGGAGTTCCCACGTGCCAAGTGTGAGGTGTTGGAGGACATTGATGAGTTGATTGACCTGCAGAGAGAGAAAGATGGTGAGAGAATGGAAGAAGAAGGGGAAGAACTGGTTGCAGAGATTGAAGGGAACATATGGGACACGTTAGTCCATGAAACGGTTATAGTTATGGATTGTTGGGAAAATGCTAAAAAAGAAAAATTATTACTATATGATGATTCCAAAATATCATCACATGTTTGCAGTCTCAGTCAATTTTAA 2253 0.4456 MGKEWYFAGRSSKRGVGGGAEAETQAPSGCMCAVFQFFDFHPFHFPNINQQHQQDQQASFKPPSCTSEDHTTVSKGAEAPRNSLEAEDGDGTVSSLSSKEDDFKIPKNIIQIKTSGATRTSGGNLNDLSSELTSSPGTKTPTLVARLMGLDLLPGANSPSFSSSCLSTPNTQDNVPHLHHHLRHKQHVQTKHRNSVDSSDISATRSLPETPRISSARRSDVDHHHRLSLQIIKENMNLGEDLELPRLSFSKRKSDENNGRSPSHYARQIVKQAKESVSRKVGQDITNTTLKAREENAGQFRSKKSPKTSSLKAIDETETSPNKHSNQSSYSPRLRFIDKHKPSTTTTSTAPSPLTPKDQNMLKLPPPPSPVNTHQPQLPRVLTKPKLQAVVPEQKEFHQNNKSVPKCKKATNEKKFNSRLIKRPPQTSDIIRNKQEEPFIIRPTSPTRASDIKNTKSKKNHPLSSNLLNNISNVPNLLPVKTDPSPSATKIPSKQSQVCDSRHQESKSSSQLSSCARQRYKQEETTTTLLATRDNNGAFFSSSTVTHPPTPQELQYITAILARTTALNSQGTPTTVSLNQPLDPSIFHHLEHPAGDKDRNFAPKDQLGHRWNRRLLFDLVDEVLREILESQEGEREKRLWFLKGGICNQRGRSVEGLVKRVWKRVEEFPRAKCEVLEDIDELIDLQREKDGERMEEEGEELVAEIEGNIWDTLVHETVIVMDCWENAKKEKLLLYDDSKISSHVCSLSQF 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01637 750 MobiDBLite consensus disorder prediction 51 99 - -
Gma16g01637 750 Pfam DUF761-associated sequence motif 129 158 IPR032795 -
Gma16g01637 750 MobiDBLite consensus disorder prediction 302 333 - -
Gma16g01637 750 MobiDBLite consensus disorder prediction 272 377 - -
Gma16g01637 750 MobiDBLite consensus disorder prediction 360 374 - -
Gma16g01637 750 MobiDBLite consensus disorder prediction 341 356 - -
Gma16g01637 750 MobiDBLite consensus disorder prediction 115 139 - -
Gma16g01637 750 MobiDBLite consensus disorder prediction 279 295 - -
Gma16g01637 750 MobiDBLite consensus disorder prediction 195 213 - -
Gma16g01637 750 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 725 - -
Gma16g01637 750 MobiDBLite consensus disorder prediction 183 223 - -
Gma16g01637 750 MobiDBLite consensus disorder prediction 413 519 - -
Gma16g01637 750 MobiDBLite consensus disorder prediction 459 519 - -
Gma16g01637 750 Pfam Domain of unknown function (DUF4378) 553 716 IPR025486 -
Gma16g01637 750 MobiDBLite consensus disorder prediction 51 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01637 Gma-Chr16 37307523 37310850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01637 110 724 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 34.365 1.68e-59 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01637 - - gmx:100791539 1402.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01637 16 37307523 37310850 Gma09g01425 09 38455551 38460325 GST
Gma16g01637 16 37307523 37310850 Gma10g02277 10 50355971 50359265 PCT
Gma16g01637 16 37307523 37310850 Gma20g01439 20 41537435 41541678 PCT
Gma10g02277 10 50355971 50359265 Gma16g01637 16 37307523 37310850 PCT
Gma20g01439 20 41537435 41541678 Gma16g01637 16 37307523 37310850 PCT