Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01619 ATGCCCCCCATGACACCTTCTCGGGTGGCAGGAGGGTTAGCCCAATCATCTTCGCATTCTGGAATTTTCTTTCAAGGAGATGGGCAGTCACAGAATGTAGTTAACTCTGACTTAAGCTCATCTTTTGTTAACTCGTCTAGCACGGTTCCAGGAGCCGGTCGTTCAAACTTGGGTCCGGTTTCTGGGGGTATGAATAATGCAGTTTTGAACAGTGTGCCAAACTCAGCACCAAGTGTTGGAGCCAGTTCTTTAGTCACGGATGCAAATTCTGCTCTCTCTGGTGGCCCCCATTTGCAGAGAAGTGCCAGTGTTAACACAGACTCATACTTACGATTACCTGCCTCTCCTATGTCATTTACATCGAATAATATAAGTATTTCTGGCTCATCGGTGATGGATGGTTCCTCTGTGGTACAACAGAGCTCTCACCAAGATCAGAATGTTCAACAATTGCAGCAGAATCAGCAGCAGCCGCAGGGTGCTTCAAGTGCTACATCTTTGCCTGCATCGCAGACTGGTCTGTCTCCCCTCCAAATGGGTGCACAAGTCCCAGGATCTTTCATTCAAGATCCAAATAATATGTCTCATCTGTCAAAGAAACCTAGAATGGATATCAAACAGGAAGATGTAATGCAGCAGCAGGTTATACAACAGATTCTTCAGAGACAAGATTCCATGCAATTCCAGGGTCGTAATCCCCAGTTACAGGCTTTgcttcagcagcagcagagactgagacaacaacaaatctttcagtcaatgccacaattacagcgagcgcacttgcaacagcagcagcaacagcaacaacaacaacagcatcaacaacaacaaatgcaattgaggcagcaattacagcaacaagtgatgcagcCCTCTTCTGCTGGCAAGCGTCCATATGACAGTGGTGTTAGTGGGGTATGTGCCCGTCGATTGATGCAGTATCTCTATCATCAAAGGCAAAGGCCAAATGATAATAGTATTGCCTATTGGAGAAAATTTGTTGCTGAATATTACTCTCCTCGTGCAAAGAAACGGTGGTGCTTGTCATTATATAGCAATGTTGGGCATCATGCACTTGGTGTTTTCCCCCAAGCAGCTATGGATGCATGGCAATGTGACATGTGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTATGAAGTGTTACCTAGGCTTAATGAAATCAAATTTGGAAGTGGAGTGATTGATGAACTTTTGTTTCTGGACTTGCCTCGTGAAACAAGATTTCCTTCTGGTGTGATGATGTTGGAATATGCAAAAGCAATTCAAGAGAGTGTATATGAGCAGCTTCGTGTTGTTCGTGAAGGTCAACTTCGCATCATATTCACTCAAGACTTGAAGATCTTATCTTGGGAGTTCTGTGCAAGACGCCACGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGGTCAACCAATTAGTTCAGGTAGCTCAAAAATGCCAGAGTACAATTGCTGAAAGTGGGGCTGATGGGGTTTCTCAGCAAGACTTACAAACAAACAGCAACATGGTATTGACAGCAGGGCGCCAGCTTGCAAAGATTTTGGAGTTGCAATCACTGAATGATTTGGGCTTTTCTAAAAGATACGTGAGATGTTTGCAGATTTCGGAGGTTGTCAATAGCATGAAAGACCTAATAGATATCTGTTCGGAGCACAAAATTGGTGCAATTGAGAGTCTGAAAAATTATCCTCGACTAGCAACAGCCTCAAAGGGCCAGATGCAAAAGATGCAGGAAATGGAACAGCTGGCAAATGTTCAAGGTCTGCCAACTGATCGAAACACACTCAACAAGCTAATGACACTGAATCCTGGATTGAACAACCATATGAACAACACTAATAATATGGTTGGTCGTGGTGCTTTGAGTGGGTCAGCCCAAGCTGCTTTAGCACTGAACAACTACCAAAATCTTCTCATGAGGCAAAATTCAATGAACTCTAGCCCTGGCTCACTTCAGCGCGAAGGGTCCTCTTTCAATAATTCAAACCCGAGTCCCTCTTCTGCTTTGCAAGGAACTGGTCCTGCTTTAATTCCAGGCTCAATGCAGAACTCGCCTGTAGGTGGTTTCCCAAGTCCCCATCTAACCCCACAGCAGCAGCAACAACAACTCCTTCAACAGCGCACATTAAGTGCAAATGGTTTACTTCAACAAAATCATTCACAGGGGTCCCAAGGAAATCAAGCTCTACAGCAGCAGCAGATGATCCAGCAACTGCTGCAGGAAATGTCAAATAACAATGGGGGACTGCAATCACAGTCTCTTGGTGGACATAATGCAAATGGGAATATTTCAAAGAACACAATGGGTTTTGGGGGCCATACTCCATCTTTAAGCGGAGGTTCTGCCAATGTTCCAGGAAACAATAGACCCATTTCAAGGAATAATAGCTTCAAAACAGCTTCAAATAGTGATTCTTCTGCGGCCGGTGGCAACAATGGATTCAACCAGAGAACATCTGATATGCAACAAAATCTACATTTGCAAGACGTGGCTCAGGATATTGGCAATGAGTTCTTGGATAACCCCTTCTTTAACAGCGATCTTGATGACAACATGGGTTTCAGCTGGAAGGCATGA 2610 0.4169 MPPMTPSRVAGGLAQSSSHSGIFFQGDGQSQNVVNSDLSSSFVNSSSTVPGAGRSNLGPVSGGMNNAVLNSVPNSAPSVGASSLVTDANSALSGGPHLQRSASVNTDSYLRLPASPMSFTSNNISISGSSVMDGSSVVQQSSHQDQNVQQLQQNQQQPQGASSATSLPASQTGLSPLQMGAQVPGSFIQDPNNMSHLSKKPRMDIKQEDVMQQQVIQQILQRQDSMQFQGRNPQLQALLQQQQRLRQQQIFQSMPQLQRAHLQQQQQQQQQQQHQQQQMQLRQQLQQQVMQPSSAGKRPYDSGVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYSNVGHHALGVFPQAAMDAWQCDMCGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDLPRETRFPSGVMMLEYAKAIQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGADGVSQQDLQTNSNMVLTAGRQLAKILELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDICSEHKIGAIESLKNYPRLATASKGQMQKMQEMEQLANVQGLPTDRNTLNKLMTLNPGLNNHMNNTNNMVGRGALSGSAQAALALNNYQNLLMRQNSMNSSPGSLQREGSSFNNSNPSPSSALQGTGPALIPGSMQNSPVGGFPSPHLTPQQQQQQLLQQRTLSANGLLQQNHSQGSQGNQALQQQQMIQQLLQEMSNNNGGLQSQSLGGHNANGNISKNTMGFGGHTPSLSGGSANVPGNNRPISRNNSFKTASNSDSSAAGGNNGFNQRTSDMQQNLHLQDVAQDIGNEFLDNPFFNSDLDDNMGFSWKA 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01619 869 PANTHER LIM DOMAIN-BINDING PROTEIN 8 154 IPR029005 -
Gma16g01619 869 PANTHER LIM DOMAIN-BINDING PROTEIN 167 867 IPR029005 -
Gma16g01619 869 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 167 867 - -
Gma16g01619 869 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 8 154 - -
Gma16g01619 869 MobiDBLite consensus disorder prediction 130 179 - -
Gma16g01619 869 Pfam LIM-domain binding protein 311 571 IPR029005 -
Gma16g01619 869 MobiDBLite consensus disorder prediction 39 58 - -
Gma16g01619 869 Coils Coil 257 287 - -
Gma16g01619 869 MobiDBLite consensus disorder prediction 130 198 - -
Gma16g01619 869 MobiDBLite consensus disorder prediction 283 303 - -
Gma16g01619 869 MobiDBLite consensus disorder prediction 652 715 - -
Gma16g01619 869 MobiDBLite consensus disorder prediction 756 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01619 Gma-Chr16 37065060 37072604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01619 306 575 C2H2 Transcription Factor Family AT1G43850 60.741 1.05e-108 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01619 - - gmx:100816886 1446.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01619 16 37065060 37072604 Gma09g01401 09 37845721 37853640 GST