Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01612 ATGGGTTTTCTCCGGCGACTCTTCGGCGGCAAGAAGCACCACAACCCACCACCCTCCTCCGACGCCTCCAAACCCAGCAAAGACAAGAAAACATGGAGCTTCGTCAAACACAGTACGAGGTACAAACCCAACACATTACCAACAACACTTAACAACAACAGCAACTTTGACCCTTCCACTTCCTCCTCTCCTTTCCCCGAATCTTTGGACGCCAACAAACATGCCATCGCCGTCGCCGCCGCCACCGCCGCTGTCGCCGAAGCCGCTCTCGCCGCCGCACACGCTGCTGCCGAGGTTGTCAGGCTGACCAGCAGCACCGGCTGTGCCTCCAGCCTGCCCGCCGCGGCGCCGCAGTCCCGGCGCGTGGCAAATGAAACCACCGCCGCCGCAGTGAAAATCCAGTCGGCGTTTCGAGGTTACTTGGCAAGGAGGGCATTGAGAGCACTTAAAGCATTGGTGAAGTTGCAAGCATTGGTGAGGGGTCACATTGTGAGGAAGCAAACTTCAGATATGCTAAGGCGCATGCAAACCTTGGTGAGACTGCAGTCCCGGGCACGTGCAACTCGTGGGAACTTGTCAGATAATATGCATTCTTTCAAGTCTTCACTTTCTCATTACCCTGTCCCTGAAGATTATCAGCACTCACTTCGTGCCTATAGTACAAAATTTGATGGATCTATTCTCAAGAGATGTAGTTCCAATGCAAATTTTAGGGACATTGACGTGGAGAAAGCTCGGTTCGGTTCCCATTGGTTAGACAGTTGGATGGAAGAAAATTCTTGGAGACAAACTAGAGATGCATCATTGAAAAATGGACACCTTGATGATGAGAAGAGTGACAAGATTCTTGAAGTAGATACTTGGAAGCCACACTTGAACTCACACCATAGTAGTGGCAGCTCATTTCAGACATCATCACATCATTATTTGTCTTCTGATTACAACAATGAGAATTTTGTGGCCTATGAGTCTCCATCCAAACGTTCTTCCAAAGCTCTAAATCCAAGTCTATCTTCTAGGGAGGTTCTTCCCTTTGGCTCTTTGAAATCTCACAAAGGAAAAGAAGAAGCGGCTTTGCAAAATGTTGAGGATAGTCCTCAAGCATTTTCTGCCTCCTCTAGACTTGGAAGTGATGCAAGGAGAGGTCCATTCACACCAACTAAGAGTGAGTGTGCATGGAGTTTCTTCAGTGGCTACCCGGGTCATCCCAATTACATGGCGAATACCGAATCTTCTAGAGCCAAGGTTAGGTCACATAGTGCTCCAAGGCAAAGAATGGAATTTGAGAGATATGGTCATTCCACAAGAAGGTCTCTTCAGGGTCTTTGGGAAGCAGGGCCTAGTTCAGATAGGGATTCTGATTTTAGGAGCAAGGCCTATGCAACAACCACAAGCAGCTGTTTGAACAGAATTGGGAGTGCCAATTTAAGGTGA 1434 0.4861 MGFLRRLFGGKKHHNPPPSSDASKPSKDKKTWSFVKHSTRYKPNTLPTTLNNNSNFDPSTSSSPFPESLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSSTGCASSLPAAAPQSRRVANETTAAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTSDMLRRMQTLVRLQSRARATRGNLSDNMHSFKSSLSHYPVPEDYQHSLRAYSTKFDGSILKRCSSNANFRDIDVEKARFGSHWLDSWMEENSWRQTRDASLKNGHLDDEKSDKILEVDTWKPHLNSHHSSGSSFQTSSHHYLSSDYNNENFVAYESPSKRSSKALNPSLSSREVLPFGSLKSHKGKEEAALQNVEDSPQAFSASSRLGSDARRGPFTPTKSECAWSFFSGYPGHPNYMANTESSRAKVRSHSAPRQRMEFERYGHSTRRSLQGLWEAGPSSDRDSDFRSKAYATTTSSCLNRIGSANLR 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01612 477 Pfam Protein of unknown function (DUF4005) 365 440 IPR025064 -
Gma16g01612 477 PANTHER IQ-DOMAIN 5-RELATED 1 475 - -
Gma16g01612 477 MobiDBLite consensus disorder prediction 1 67 - -
Gma16g01612 477 MobiDBLite consensus disorder prediction 37 67 - -
Gma16g01612 477 SMART iq_5 125 147 IPR000048 GO:0005515
Gma16g01612 477 SMART iq_5 148 169 IPR000048 GO:0005515
Gma16g01612 477 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Gma16g01612 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 171 IPR027417 -
Gma16g01612 477 Gene3D - 123 179 - -
Gma16g01612 477 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Gma16g01612 477 PANTHER CALMODULIN-BINDING PROTEIN 1 475 - -
Gma16g01612 477 Pfam IQ calmodulin-binding motif 150 167 IPR000048 GO:0005515
Gma16g01612 477 Pfam IQ calmodulin-binding motif 127 147 IPR000048 GO:0005515
Gma16g01612 477 MobiDBLite consensus disorder prediction 344 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01612 Gma-Chr16 36992018 36997647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01612 1 443 IQD Protein Family AT5G62070 46.171 1.86e-66 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01612 - - gmx:100785181 860.522