Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01573 ATGGAGATCATGGAGTTCTCAGCACTTGCCCTCTTTTCTATTTTACCTCTTCTTTTGCTCTTGAAATTAACGTTTTCTTGGTGGGTTTCACCAATCATAAACCATCTTAAGCTTAAAAGATGTGGATTTGGAGGGCCACCCCCAAGCTTTCCTCTTGGAAACATTCAAGAGATGAAAAAGAAAACTAGCGTTAGTTCTTCATTGGGGTCCTCTAATCTCACCCATGATATACACTCCACTGTGTTCCCCTATTTTTTTCGGTGGCAAAACTCTCACGGAAAGGTGTTTATCTATTGGCTTGGTACAGAACCGTTTTTGTACATTGCAGATCCAGAATTCTTGAAAAAAATGTCCACAGAGGTCTTGGCCAAGAGATGGGGAAAACCTAGAGTGTTTAGACATGACAGAGATCCTATGTTTGGAAATGGTTTGGTTATGGTTGAAGGCAATGAATGGGTTCGTCACCGACATGTTATAGCACCAGCATTTTCTCCTCTTAATTTGAAGGCAATGGCAAGCATGATGACTGAGTCTACAAATCAGATGATAGATAGGTGGATTGCACAAATCAACTCCGGAAACCCCGAAATCGATGTGGAAAGAGAGGTTGTAGAAACGGCCGGAGAAATTATTGCAAAAACAAGCTTTGGCATGAAGGGGAAAAATGCAAAGGAAGTGTCTGAAAAACTACGTGCCCTACAAATGACACTTTTTAAGACAACAAGATATGTGGGTGTTCCATTTGGCAAGTGTTTCAACGTCAAGAAAACCCTAGAGGCCAAGAAGCTTGGCAAAGAGATTGACAAGCTCTTGTTATCCGTCATAACATCTCGTATGAAATCAATCAAAAGACAAACTCAAGAAGACTTGTTGGGATTGTTGTTGCAAGGAAACAATCATCAAGGTGATGGCAAGTTAGGGAAGACATTCACCACTAGAGACTTGTTGGATGAGTGCAAGACTTTCTTCTTTGCTGGCCATGAAACAACGGCATTGGCTATCTCATGGACTTTGTTGCTTCTAGCTATAAATGAAGATTGGCAAATCCAGTTAAGAGATGAGATAAGAGAAGTGGTCGGTGATAAAGAACTTGATATCAACGTGCTTGCGGGGCTTAGAAAGATGAAGTGGGTGATGAATGAAGTTCTAAGACTCTACCCAACGGCACCAAATGTGCAAAGGCAAGCAAGGGAAGACATTAAAGTTGATAACTTAACAGTGCCTAATGGGACCAACATGTGGATCGATGTTGTGGCGATGCACCATGACCCGGCATTGTGGGGAAAAGATGTCAACGACTTTAGACCAGAGAGATTCATGAATGACGTCAATGGTGGATGTAACCACAAAATGGGGTACTTGCCTTTTGGTTTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGAGCTTTATGGAGTATAAGATAGTGTTAACCCTACTCCTGTCTAGATTTAGTTTCAAAGTTTCACCAGGTTATAACCATGCACCCTCTATCATGCTCTCCCTTAGGCCCACCTATGGACTTCATCTCATAGTTCAGCCACTTTAG 1548 0.4193 MEIMEFSALALFSILPLLLLLKLTFSWWVSPIINHLKLKRCGFGGPPPSFPLGNIQEMKKKTSVSSSLGSSNLTHDIHSTVFPYFFRWQNSHGKVFIYWLGTEPFLYIADPEFLKKMSTEVLAKRWGKPRVFRHDRDPMFGNGLVMVEGNEWVRHRHVIAPAFSPLNLKAMASMMTESTNQMIDRWIAQINSGNPEIDVEREVVETAGEIIAKTSFGMKGKNAKEVSEKLRALQMTLFKTTRYVGVPFGKCFNVKKTLEAKKLGKEIDKLLLSVITSRMKSIKRQTQEDLLGLLLQGNNHQGDGKLGKTFTTRDLLDECKTFFFAGHETTALAISWTLLLLAINEDWQIQLRDEIREVVGDKELDINVLAGLRKMKWVMNEVLRLYPTAPNVQRQAREDIKVDNLTVPNGTNMWIDVVAMHHDPALWGKDVNDFRPERFMNDVNGGCNHKMGYLPFGFGGRMCVGRNLSFMEYKIVLTLLLSRFSFKVSPGYNHAPSIMLSLRPTYGLHLIVQPL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01573 515 Pfam Cytochrome P450 80 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g01573 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Gma16g01573 515 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g01573 515 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g01573 515 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g01573 515 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g01573 515 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g01573 515 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g01573 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 510 - -
Gma16g01573 515 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 10 510 - -
Gma16g01573 515 Gene3D Cytochrome P450 31 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g01573 515 SUPERFAMILY Cytochrome P450 75 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g01573 515 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g01573 515 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g01573 515 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma16g01573 515 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01573 Gma-Chr16 36168222 36171958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01573 1 515 Cytochrome P450 AT5G52400 58.745 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01573 - - gmx:100810679 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01573 16 36168222 36171958 Gma09g01321 09 35615197 35618776 GST
Gma16g01573 16 36168222 36171958 Gma10g02226 10 49825316 49828691 PCT
Gma16g01573 16 36168222 36171958 Gma20g01494 20 42054556 42057612 PCT
Gma10g02227 10 49843078 49845329 Gma16g01573 16 36168222 36171958 PCT
Gma20g01493 20 42042518 42044992 Gma16g01573 16 36168222 36171958 PCT