Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01566 ATGGATTCAAAGCGATTCGATCGCGCGAGTCGCAAGGTTCGGGTCGTCACCAGGATCCGCGGGTTTGCGGGTCCCGAGGCTAATTCCGAACCTGCCGCTTCCAGAACGGTGGAGTGGGTTTCGGTGAACCGCGAAAATTTGGAGGATGTCACCATCTCCTTCGGAGACCAATCTTCCAGTCGGTATTCGGTGGACTATTGCTATAAGGAAGATGAAGATAATGAATTGATATATTCAAGGGAGGTGAAGCCTCTTGTGTCTGCAGCTTTTGATGGTCATAACAGCACTGTTATTGCACATGGTGCTAGGGGTAGTGGAAAGACGCACGCAATTCAGGGCTCTGCTGAGAGACCAGGTTTGGCAGTGCTTGCTATCGCTGAGTTTCTTTCAGTGGCTGAGAAAAATGGGAAAAACATAGCTGTTTCTTTCTATGAGGTTGATCATCAGGAGCGGGCCATGGATTTATTAAATCCAGAGAAGCCACCAATTTTGGTTTTTGAAGATCATGGCAGAATTCAGTTTAAAGGACTAACTCAGGTTCTTGTGAAATCCATTGCTGAATTTCAGAATTTGTACTCCTCTGCATGTTTTGCACTGAAGGGAGCTCCCAAAAAAGGAGGATGTGAACATGTTCATAGAAGCCACATGGGATTAATCGTCCATGTCTTTTCCCAGAATGGAAGTCTTGTAAGCAAAGTGAATTTTGTTGACTTGGCAGGTTATGAAGATGCTAGAAAGAAAAGTGGTGATGGATCCTACCTTGCTGAGATTAACAAAATTAACAAGTCAATTTATGCCTTATTGAATGTTTGTCATGCTTTGAGTACAAATGAAAGTCGTGTTGCCTACCGGGAAAGCAAAATTACACGCATGCTGCAGGATTCGTTGAGGGGGACTAGCAAAATTTTATTGGTTTCATGCTTGAACCCATCATTTTGCCAAGACACTATTTACATGGTTAGCTTGGCATCACGGTCATGTCATTGGATTCATCGGGCATTCTTAGATTCCACCAAGAGAAATGCAAGTTCAGCAAAACAAATGGTGAATTCTCATAAGAACCAGATACCCAAAAGTGTTTCAGGAACAGCAAAGAAATTACATGTTTCTTCTAAATTACTTGATAAAAAAGTTGTTGTTGCTAAGAAGTCTGCAATAAAAGGAAGGAAATTGTTTGATGAAGCCAGTCACTCTGTTACTAAAGCTGAGAAGGAAATTGCTGTTGCCCAAGTTACTCAAGCATCAAAGTCTTTATTGGACAATTCATTGTTGGAAACTGGAAGTGatgtcgtactcaactctggaatggaaaagaagactggaaatcatgttgtactcaactctggaatggaaaagaagaccagaaatcatgttgtactcaactctggaatggaaaagaagaccagaaatcatgttgtactcaactctggagtggaaaagATGATACACAGCTACATTGATTTTTTTTTTTTGTCATTTACAGACCATAGCATAAACAAGGAGAACAACAATTCAAGGGCAATCAGAGATGATTCATTGGCTATTAATTCACCACCTATCAGTTCTCAGTTGCAGGATCTTTCTAATAGTCTTAAAATGCTATATTCTTCAACCCCATCATGCATGCAGATACCAAAAACGGAACCCATTCCACTTGATATTGTTGAACCAAAAACTCCAACAATTGAACAAAACATGAGCATTAACAGATGGGATGCAATGAATGCCAAAAGTCCCTGGGAGACATTCAGCATGCGAGGTTCTGGAATGAAGAGTTCTCTTGTTCAAGAATACCTCAGGTTTTTAAATACAGCTAACAAGGAGGAATTAAAAAAATTGAAGGGAATCGGGGAGAAGAGAGCTACCTTCATACTTGAACTCCGAGAAGAATCTCCAGAGCCTTTCAAGAGTCTGGATGATTTGAAGGATATTGGGCTTTCGGCAAAGCAGGTTAAAGGAATAATGAAGAAGGAAGTCGGAGAGCTTTTCAGTTAG 1995 0.3794 MDSKRFDRASRKVRVVTRIRGFAGPEANSEPAASRTVEWVSVNRENLEDVTISFGDQSSSRYSVDYCYKEDEDNELIYSREVKPLVSAAFDGHNSTVIAHGARGSGKTHAIQGSAERPGLAVLAIAEFLSVAEKNGKNIAVSFYEVDHQERAMDLLNPEKPPILVFEDHGRIQFKGLTQVLVKSIAEFQNLYSSACFALKGAPKKGGCEHVHRSHMGLIVHVFSQNGSLVSKVNFVDLAGYEDARKKSGDGSYLAEINKINKSIYALLNVCHALSTNESRVAYRESKITRMLQDSLRGTSKILLVSCLNPSFCQDTIYMVSLASRSCHWIHRAFLDSTKRNASSAKQMVNSHKNQIPKSVSGTAKKLHVSSKLLDKKVVVAKKSAIKGRKLFDEASHSVTKAEKEIAVAQVTQASKSLLDNSLLETGSDVVLNSGMEKKTGNHVVLNSGMEKKTRNHVVLNSGMEKKTRNHVVLNSGVEKMIHSYIDFFFLSFTDHSINKENNNSRAIRDDSLAINSPPISSQLQDLSNSLKMLYSSTPSCMQIPKTEPIPLDIVEPKTPTIEQNMSINRWDAMNAKSPWETFSMRGSGMKSSLVQEYLRFLNTANKEELKKLKGIGEKRATFILELREESPEPFKSLDDLKDIGLSAKQVKGIMKKEVGELFS 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01566 664 SUPERFAMILY RuvA domain 2-like 593 657 IPR010994 -
Gma16g01566 664 SMART kinesin_4 10 337 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01566 664 Coils Coil 335 355 - -
Gma16g01566 664 Pfam Kinesin motor domain 36 325 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01566 664 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 325 IPR027417 -
Gma16g01566 664 Pfam Helix-hairpin-helix motif 602 650 - -
Gma16g01566 664 PANTHER KINESIN-LIKE PROTEIN KIN-10C 12 661 - -
Gma16g01566 664 PANTHER KINESIN-RELATED 12 661 IPR027640 GO:0003777|GO:0007018
Gma16g01566 664 Gene3D - 590 662 - -
Gma16g01566 664 PRINTS Kinesin heavy chain signature 281 302 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01566 664 PRINTS Kinesin heavy chain signature 232 250 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01566 664 PRINTS Kinesin heavy chain signature 92 113 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01566 664 ProSiteProfiles Kinesin motor domain profile. 12 329 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma16g01566 664 Gene3D Kinesin motor domain 1 328 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01566 Gma-Chr16 36082337 36087478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01566 62 311 Calmodulin-binding Proteins AT5G65930 29.391 2.37e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01566 K10403 - gmx:100809612 1179.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01566 16 36082337 36087478 Gma16g01566 16 36082337 36087478 ECH
Gma16g01566 16 36082337 36087478 Gma09g01304 09 35350066 35355035 GST