Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01554 ATGGCAGGCGAGGTGGTGAAGAAGGAAGACTCTCTCAACCTGAAAGTCACTAACAAGAGTCATGTTCAACCTGAGGAGAAAATTGGAAGGAAAGAGTACCAGCTGGTCACTTTTGATCTTCCCTACTTGGCCTTCTACTACAACCAGAAGCTGCTGTTTTACAAGGGTGAAGATTTTGAGGGTATGGTCCAAAAACTCAAAGTTGGACTTGGTGTGGTGCTGAAGGAGTTTCACCAACTTGCTGGTAAGTTAGGGAAAGATGAAGAGGGGGTGTTCAGAGTGGAGTATGATGATGACATGCTTGGTGTGGAGGTTGTTGAAGCTGTTGTTGTTGATGATAATGAGATTGGTGTGGATGATCTAACTGTGGCTGAAATTAGTAACACTAATTTGAAGGAGCTGATACCTTATAGTGGTATCTTGAATTTGGAAGGCATGCATAGGCCTTTGCTGGCTGTTCAGTTAACGAAGCTCAAAGATGGGCTTGCAATGGGCCTAGCATTCAACCATGCTGTCTTGGACGGTACTGCCACCTGGCAATTCATGACCTCATGGGCCGAGATCTGCAGCGGTTCACCCTCCACGTCAGCACCACCCTTCCTGGACCGAACCAAGGCCCGGAACACACGCGTGAAATTGGACCTCTCGCTTCCTGAGCCCAACGGCCCACCAACTTCCAACGGTGAGGCAAAGCCCGCGCCAGCACTTAGGGAAAAGATCTTCAAATTCTCCGAGTCAGCCATCGACAAGATCAAGTCAACGGTCAACGAGAACCCTCCATCCGATGGCTCAAAACCATTCTCAACATTTCAGGCTCTTTCCTCCCACGTTTGGCGCCATGTAAGCCATGCACGTAACTTGAAGCCAGAGGACTACACGGTGTTCACTGTCTTCGCCGATTGTCGGAAGCGGGTGGACCCACCAATGCCGGAGAATTATTTCGGAAACCTAATTCAAGCTATTTTTACCGTTACAGCGGTTGGGCTATTAGCCGCCCATCCGCCACAATTTGGGGCTTCATTGATCCAGAAAGCCATTGAAGCCCACAATGCTAAGGCAATTGATGAACGTAACAAGGAGTGGGAGAGTACACCCAAAATTTTTCAATTCAAAGATGCTGGGGTGAATTGTGTGGctgttggaagctccccaaggtttaaggtttatgacattgattttgggtgggggaagccagagaatgtgAGGAGTGGAACTAATAACAAGTTTGATGGGATGATTTATTTGTACCCGGGGAAGAGTGGAGGGAGGAGCATTGATGTGGAACTAACATTGGAGCCTGAGGCTATGGAGAGGTTGGAGCAAGACAAGGATTTTCTTTTGGAAGCATGA 1350 0.457 MAGEVVKKEDSLNLKVTNKSHVQPEEKIGRKEYQLVTFDLPYLAFYYNQKLLFYKGEDFEGMVQKLKVGLGVVLKEFHQLAGKLGKDEEGVFRVEYDDDMLGVEVVEAVVVDDNEIGVDDLTVAEISNTNLKELIPYSGILNLEGMHRPLLAVQLTKLKDGLAMGLAFNHAVLDGTATWQFMTSWAEICSGSPSTSAPPFLDRTKARNTRVKLDLSLPEPNGPPTSNGEAKPAPALREKIFKFSESAIDKIKSTVNENPPSDGSKPFSTFQALSSHVWRHVSHARNLKPEDYTVFTVFADCRKRVDPPMPENYFGNLIQAIFTVTAVGLLAAHPPQFGASLIQKAIEAHNAKAIDERNKEWESTPKIFQFKDAGVNCVAVGSSPRFKVYDIDFGWGKPENVRSGTNNKFDGMIYLYPGKSGGRSIDVELTLEPEAMERLEQDKDFLLEA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01554 449 Gene3D - 11 215 IPR023213 -
Gma16g01554 449 Pfam Transferase family 14 445 - -
Gma16g01554 449 Gene3D - 219 442 IPR023213 -
Gma16g01554 449 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 445 - -
Gma16g01554 449 PANTHER BAHD ACYLTRANSFERASE DCR-RELATED 16 445 - -
Gma16g01554 449 MobiDBLite consensus disorder prediction 214 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01554 Gma-Chr16 35908993 35912719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01554 64 448 Monolignol Biosynthesis Gene Families AT5G48930 27.340 7.60e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01554 K19747 - gmx:100790669 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01554 16 35908993 35912719 Gma16g01554 16 35908993 35912719 ECH
Gma16g01554 16 35908993 35912719 Gma09g01289 09 35009011 35012695 GST