Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01547 ATGGAGACTCAAAAGCTAATTATACATTTCATTCTTCTTCTTCTTTTCATTTCTTGTTCATCCTCTTTCACTCCCATAGATAACTACCTTCTTAGCTGTGGATCACAGAACAATGCTTCCCTCTTCAACCGCATCTTCGTCAGTGATTCCACCAGCCATGGCTCAATTTTTCTCTCTGCTGACAAATCCATTTCCCTCACCTACCAAGACCCTCCTCCAAATTTGCCTACTTTGTACCACACTGCAAGAGTTTTCCCCATCACTGGGAGCTACAGGTTCAACATGAGGATAAATGGTACCCACTTGGTTCGTTTTCATTTTTCACCTTTTAAGGCTCAAGGATTTGATCTAAAATCTGCCAACTTTAGTGTCTTGGTTGATGGTAATTTGGTGCTGAGAAATTTCAAGCCAATTAATGGTGCACTGCTTAAGGAGTTTATTTTGAAGATAGAGTCAAATTTGCTTGAAATTTTATTTAGACCTGAAGGTAATTCAGGTTTTGGCTTTGTGAATGCTGTAGAGGTGTTTACTGCTCCTGCTGATTTTGTCATAGATTATGGAGCTAGGTTGGTTGGTCCTTCTGGTGTGGTAGAGTACAAGAACCTTTCATCTCAGGTTTTGGAAACTGTGCATAGGATTAATGTTGGGGGTGTGAAAGTAACTCCTTTTAATGACACCCTTTGGAGGACTTGGATTCCTGATGAGGAATTTCTGGTTCTTAAGGATGCTGCTAAGCGTGTGGGGAGCACTCACACACTAAATTACCAGAAGGGAGGCGCGACTCGAGAGATCGCTCCGGATAATGTTTATATGACTGCTCAGGAAATGAATAAGGATCACTCCATTATTGCTTCACAGTTCAACATAACCTGGGATTTTCCAGTGGCTCCAGGTGGTGTTCGGCACTTGGTTCGGCTGCATTTCTGTGATATTGTTAGTCCTGCTCTTAATTTGCTCTACTTTGATGTGTATATCAATGGGTATTATGCTTACAAGGATCTTGATTTGTCATCCCTTACTGTCCATGTGCTTGCATCTCCGTTCTATGTGGATTTTGTTGTAGATTCCAATGAATTGGGTGTTATTCAAATAAGTGTTGGCCCTTCTGAACTGAGTAGTTCTGCAAGGATGAATGCCATTTTGAATGGTGTAGAGATAATGAAGCTAGTGAATGTTGTGGACTCACATGTTGTTCCAAGGAAGAAGAGGTTGTGGGTGTTGGAAGAAGAAGAAAACGCCAAGACAAAGAACAATGGAAAGTGTAGGATGGACGCCTTTACGCGTGTACGGAGGGAGTTCACTTAG 1305 0.4169 METQKLIIHFILLLLFISCSSSFTPIDNYLLSCGSQNNASLFNRIFVSDSTSHGSIFLSADKSISLTYQDPPPNLPTLYHTARVFPITGSYRFNMRINGTHLVRFHFSPFKAQGFDLKSANFSVLVDGNLVLRNFKPINGALLKEFILKIESNLLEILFRPEGNSGFGFVNAVEVFTAPADFVIDYGARLVGPSGVVEYKNLSSQVLETVHRINVGGVKVTPFNDTLWRTWIPDEEFLVLKDAAKRVGSTHTLNYQKGGATREIAPDNVYMTAQEMNKDHSIIASQFNITWDFPVAPGGVRHLVRLHFCDIVSPALNLLYFDVYINGYYAYKDLDLSSLTVHVLASPFYVDFVVDSNELGVIQISVGPSELSSSARMNAILNGVEIMKLVNVVDSHVVPRKKRLWVLEEEENAKTKNNGKCRMDAFTRVRREFT 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01547 434 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gma16g01547 434 Pfam Malectin-like domain 31 388 IPR024788 -
Gma16g01547 434 PANTHER OS07G0166700 PROTEIN 16 407 IPR045272 GO:0004714|GO:0006468
Gma16g01547 434 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 16 407 - -
Gma16g01547 434 Gene3D - 206 390 - -
Gma16g01547 434 Gene3D - 28 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01547 Gma-Chr16 35813007 35814385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01547 5 395 Glycosyltransferase AT4G00300 42.327 2.15e-102 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01547 - - gmx:100787484 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01547 16 35813007 35814385 Gma09g01268 09 34584533 34587046 GST
Gma16g01547 16 35813007 35814385 Gma10g02199 10 49554220 49556565 PCT
Gma16g01547 16 35813007 35814385 Gma20g01520 20 42251663 42254407 PCT
Gma10g02199 10 49554220 49556565 Gma16g01547 16 35813007 35814385 PCT
Gma20g01520 20 42251663 42254407 Gma16g01547 16 35813007 35814385 PCT