Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01529 ATGACTCATGAAGATTGGGATCTCTTTGCCATAGTTAGAAGTTGCAAAGCTGCTACCTTTACTGCCACCACAAACACTGAAACCCCACCCACCCCCGCCCCCAACACTACCTCATGCTTGGATTTGAGCCAAGAAAATGGCTCATTCTCTTTTCCCAATCTTGTGCAACCAACAACGAATGGGTTCCAAGAGCTTCAACATCAACAATTGGTAATAAACTTCAACCCCACCAACACCACGAGCACCACTTCTAGCACTAGCACTATCACTAGTGGTCTTGGCATCAATCCCAACTCCACTTTTTCTGAGGTTGCGGGATTCATTGGACAACAGCAAGGTTACCACCACCATCTCCTTCCTGCTCCCACAAATCACACCTCCATTGGAACACCCACCACTACTGGTTTTGACAGATTCCAACACCACCAACAACAGCAACTCCAAAGCCCAGAACAAAACCAACCACCCCTTCAAGCACCCCAAACAAGTCCCATCCTTTCACCAACCACACAACCACAAACACCCAGATCAAGAAAAAGAAAAAGCCATCAGAAGAAAATGGTGTGCCATGTAACAGCAGACAATCTGTCATCAGACTTGTGGGCATGGCGAAAATATGGGCAAAAACCCATCAAAGGCTCTCCATATCCAAGGAACTATTACAGATGCAGTAGCTGCAAAGGCTGCGTCGCGAGAAAGCAAGTAGAACGAAGCACAACCGAACCCAACACGTTCATCGTGACCTACACCGGCGACCACAAACACGCGAAACCTGTTCAGCGGAACTCCCTCGCGGGAAGCACTAGAACCAAACCATCCACGACCCGTTTATCCGAACCCAATGAATCCGTGACTTGCCCAAAAAGAGAAAACGCGTGTTCTTCAAATTCCGAGCTTTCTCCCATGTTGTCAGTTTCCGACACGCCGAAAAACGAGGAAACGGTCTCGGCCGGTGAACCCGATTGCCCTGACATGGAAATTGAGCCCTCCGAAAACGACGACGACGACGTTTTGATACCCAACACGGGTGCCATGTCCGACGCTGTTCTCTTGGGCTTGACCAATGTTGACCGCGACGGCGTTTCGACGCTTGGAATTGATCAGAAAAACACTTCCGGGTCGTGCCAGTCTTATCCGGAACCCGACCCGTTTTCAAAACCCGGTTTATATTCTTCAGCCCTTGGCCCCGCAAAACTCGCCGACCTTCTTGATGACTGTAATTTGTAA 1227 0.4931 MTHEDWDLFAIVRSCKAATFTATTNTETPPTPAPNTTSCLDLSQENGSFSFPNLVQPTTNGFQELQHQQLVINFNPTNTTSTTSSTSTITSGLGINPNSTFSEVAGFIGQQQGYHHHLLPAPTNHTSIGTPTTTGFDRFQHHQQQQLQSPEQNQPPLQAPQTSPILSPTTQPQTPRSRKRKSHQKKMVCHVTADNLSSDLWAWRKYGQKPIKGSPYPRNYYRCSSCKGCVARKQVERSTTEPNTFIVTYTGDHKHAKPVQRNSLAGSTRTKPSTTRLSEPNESVTCPKRENACSSNSELSPMLSVSDTPKNEETVSAGEPDCPDMEIEPSENDDDDVLIPNTGAMSDAVLLGLTNVDRDGVSTLGIDQKNTSGSCQSYPEPDPFSKPGLYSSALGPAKLADLLDDCNL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01529 408 Pfam WRKY DNA -binding domain 199 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma16g01529 408 MobiDBLite consensus disorder prediction 123 175 - -
Gma16g01529 408 SUPERFAMILY WRKY DNA-binding domain 192 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma16g01529 408 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 4 369 - -
Gma16g01529 408 SMART WRKY_cls 197 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma16g01529 408 MobiDBLite consensus disorder prediction 120 187 - -
Gma16g01529 408 Gene3D WRKY domain 181 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma16g01529 408 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 369 IPR044810 GO:0003700
Gma16g01529 408 MobiDBLite consensus disorder prediction 261 313 - -
Gma16g01529 408 MobiDBLite consensus disorder prediction 367 389 - -
Gma16g01529 408 MobiDBLite consensus disorder prediction 254 324 - -
Gma16g01529 408 ProSiteProfiles WRKY domain profile. 192 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01529 Gma-Chr16 35634549 35636080 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01529 176 271 WRKY Transcription Factor Family AT5G52830 79.167 9.02e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma16g01529 WRKY 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01529 - K13425 gmx:100796829 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01529 16 35634549 35636080 Gma09g01229 09 33848007 33849458 GST
Gma16g01529 16 35634549 35636080 Gma10g02188 10 49465910 49467025 PCT
Gma16g01529 16 35634549 35636080 Gma20g01530 20 42322706 42324676 PCT
Gma10g02188 10 49465910 49467025 Gma16g01529 16 35634549 35636080 PCT
Gma20g01530 20 42322706 42324676 Gma16g01529 16 35634549 35636080 PCT