Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01528 ATGGGGAGTGCAACTGAGACACTCTGTGGACAAGATTTCGAAGCTGGGCAGCAACTCCAAAGCCCAGAACAAAACCAACCACCCCCTCAAGCACCCCAAACAAGTCCCATCCTTTCACCAACCACACAACCGCAAACACCCAGATCAAGAAAAAGAAAAAGCCAACAGAAGAAAATGGTGTGCCATGTAACCGCAGACAACCTGTCATCAGACTTGTGGGCATGGCGAAAATATGGACAAAAACCCATCAAAGGCTCTCCATATCCAAGGAACTATTACAGATGCAGTAGCTGCAAAGGCTGCGTCGCGAGAAAGCAAGTAGAACGAAGCACCACCGAACCCAACACGTTCATCGTGACCTACACCGGCGACCACAAACACGCGAAACCTGTTCACCGGAACTCCCTCGCGGGAAGCACCAGAACCAAGCCATCCACGACCCGTTTATCCGAACCCAATGAATCCGTGTCTTGCCCAAAAAAAGAAAACGCATGTTCTTCAAATTCCGAGCTTTCTCCAATGTTGTCAGTTTCTGACACGCTGGAAAACGAGGAAACGGTCTCGGCCAGCGAACCCGATTGCCCTGACATGGAAATTGAGCCCTCTGATAACGACGACGTTTTGATACCTAACACGGGTGCCATGTCCGACGCTGTTCTCTTGGGCTTGACCAATGTTGAACGCGACGGCGTTTCGACGTCAGAAAAACACTTCCGGGTCGGGACAGTCTTATCCGGAACCCGACCCGATTTCCAACCCGGTTTAGATTCTTCAGCTCTTCGCCGCACAAAACTCGCCGACCTTCATGATGATTGTAATTTGTAA 825 0.5042 MGSATETLCGQDFEAGQQLQSPEQNQPPPQAPQTSPILSPTTQPQTPRSRKRKSQQKKMVCHVTADNLSSDLWAWRKYGQKPIKGSPYPRNYYRCSSCKGCVARKQVERSTTEPNTFIVTYTGDHKHAKPVHRNSLAGSTRTKPSTTRLSEPNESVSCPKKENACSSNSELSPMLSVSDTLENEETVSASEPDCPDMEIEPSDNDDVLIPNTGAMSDAVLLGLTNVERDGVSTSEKHFRVGTVLSGTRPDFQPGLDSSALRRTKLADLHDDCNL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01528 274 MobiDBLite consensus disorder prediction 1 24 - -
Gma16g01528 274 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 16 232 IPR044810 GO:0003700
Gma16g01528 274 MobiDBLite consensus disorder prediction 1 62 - -
Gma16g01528 274 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 16 232 - -
Gma16g01528 274 ProSiteProfiles WRKY domain profile. 64 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma16g01528 274 MobiDBLite consensus disorder prediction 126 173 - -
Gma16g01528 274 SMART WRKY_cls 69 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma16g01528 274 MobiDBLite consensus disorder prediction 135 173 - -
Gma16g01528 274 SUPERFAMILY WRKY DNA-binding domain 64 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma16g01528 274 Gene3D WRKY domain 52 123 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma16g01528 274 Pfam WRKY DNA -binding domain 71 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01528 Gma-Chr16 35597069 35601349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01528 48 209 WRKY Transcription Factor Family AT5G52830 56.173 2.05e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma16g01528 WRKY 8.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01528 K13425 - gmx:100794708 501.13