Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01520 ATGTCAACCATCACATCAAAATGGTTTGGAGAGGATGAAAAGAATGTCCGAGCTCTGTTCACACTGGCAGCTAAGGTTGCCCCAACAATTATCTTTGTTGACGAGGTTGACAGCATGCTTGGACAGAGGACTAGAGTAGGAGAGCATGAGGCTATGAGGAAGATTAAAAATGAATTCATGACACACTGGGATGGGCTATTAACAGGACCTAATGAGCAAATTTTGGTTCTTGCAGCAACCAACAGGCCATTTGACCTTGATGAAGCTATCATAAGACGGTTTGAGAGAAGCAGGATCTTGGTTGGTCTTCCATCTGTTGAGAACAGGGAAATGATCTTGAAGACTCTTTTGGCTAAAGAAAAACATGAAAACTTAGACTTCAAAGAGCTGGCAACCATGACAGAAGGATATACTGGAAGTGATCTTAAGAATTTGTGCATCACTGCGGCTTATCGACCTGTTAGAGAGCTAATACAGCAGGAGAGAATGAAGGACATtgatacggatttcaccagggggtacgaatga 528 0.3996 MSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTGPNEQILVLAATNRPFDLDEAIIRRFERSRILVGLPSVENREMILKTLLAKEKHENLDFKELATMTEGYTGSDLKNLCITAAYRPVRELIQQERMKDIDTDFTRGYE 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01520 175 Gene3D - 2 103 IPR027417 -
Gma16g01520 175 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 168 - -
Gma16g01520 175 CDD AAA 1 103 - -
Gma16g01520 175 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 168 - -
Gma16g01520 175 Gene3D - 104 167 - -
Gma16g01520 175 Pfam AAA+ lid domain 124 166 IPR041569 -
Gma16g01520 175 Pfam ATPase family associated with various cellular activities (AAA) 2 97 IPR003959 GO:0005524|GO:0016887
Gma16g01520 175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 168 IPR027417 -
Gma16g01520 175 ProSitePatterns AAA-protein family signature. 74 93 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01520 Gma-Chr16 35378431 35379484 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01520 6 163 Calmodulin-binding Proteins AT3G56690 38.889 2.42e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01520 - - gmx:100793125 342.813