Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01506 ATGGTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAGAACACAAGGGAAACTGCCTTTGCAATCAGGAAGTTGCCCTTGGTCAAGGCTAAAAGGTACTTGGAAGATGTTCTTGCCCACAAGCAGGCAATTCCATTCAGACGTTTTTGTCGAGGTGTTGGAAGGACAGCCCATGCTAAGAATAGACACTCTAATGGCCAAGGACGGTGGCCTGTCAAGTCAGCAAAATTCATTCTTGATTTGCTCAAAAATGCTGAGAGCAATGCTGAAGTGAAAGccGCTGCCGCTGAGAGTGCCACCACAGAGCGGAACGCCACAAATGGTGAATATCAAAATTCGCTGTTCCAACGGTGA 396 0.4722 MVKYSREPDNPTKSCKARGADLRVHFKNTRETAFAIRKLPLVKAKRYLEDVLAHKQAIPFRRFCRGVGRTAHAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKAAAAESATTERNATNGEYQNSLFQR 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01506 131 SUPERFAMILY Ribosomal protein L22 1 109 IPR036394 GO:0003735|GO:0005840|GO:0006412
Gma16g01506 131 PANTHER 60S RIBOSOMAL PROTEIN L17 1 112 IPR005721 GO:0003735|GO:0006412|GO:0015934
Gma16g01506 131 MobiDBLite consensus disorder prediction 113 131 - -
Gma16g01506 131 MobiDBLite consensus disorder prediction 110 131 - -
Gma16g01506 131 Pfam Ribosomal protein L22p/L17e 17 112 IPR001063 GO:0003735|GO:0005840|GO:0006412
Gma16g01506 131 Gene3D Ribosomal protein L22/L17 1 122 IPR036394 GO:0003735|GO:0005840|GO:0006412
Gma16g01506 131 TIGRFAM uL22_arch_euk: ribosomal protein uL22 4 112 IPR005721 GO:0003735|GO:0006412|GO:0015934
Gma16g01506 131 PANTHER 60S RIBOSOMAL PROTEIN L17-1 ISOFORM X1 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01506 Gma-Chr16 34596824 34597585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01506 1 105 Cytoplasmic Ribosomal Protein Gene Family AT1G67430 88.571 3.71e-69 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01506 K02880 - gmx:100499784 196.823