Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01503 ATGATGCATTTTTTTACCATTGGCTATACACAACTTCCCTCAACTTTTTGTTCACTAAAGTCAATTTTCTTCTTTGCTTCCACTTGTTCTTCAGCAAACTCACACAACCACCTGAAAACTGAATCACAACCCTCTCTTCTTCTCTTACTCTCTCTTTCTCTTTGTTTTTCGATGGACCCGAAGTTCATCGGAAAGCCGCTGGCGATGGTGGACCTGGACCGGGACCGGATGTCGGAGCGTGGGTCCCACCACCGGCGTTCCCACTCCGACACCTCCTTCCGCTTCGCTGCCAACTTCGACGAGCTTCTCCTCTTCGACCCCTCCGACCTCGACATCTCCGGCCTCCCGTCGCCGCTCCCTCTGCCGTCGCAGGGCGCCGGCGGCGTGGTTCCGATGTCCGTCGTCTCCGAGGAGTCTGGCGGACGGCCGAGGCGGTCCGGGGCTTCCGCCGGCGGGCACCTGCGGAGTCTGTCGGTGGATTCTGACTTCTTCGATGGGCTCGGGTCCGGCGTCGGCGGCGATGAGAGAGGTGCCGGGAATGGCGGCGGCGAGCGGCACAGCAACTCGATGGAGGGGTCGTCGACGACGTCGTTTGAGGCGGACTCGGCGACGATGATGGATGGCATGAAGAAAGCTACGGCCCCTGATAAACTTGCTGAGCTTGCTCTTACGGATCCCAAAAGAGCTAAGAGGATGCTTGCTAACAGGCAATCTGCTGCAAGATCTAAGGAGAGGAAGATTCGTTACACAAGTGAGTTGGAGAAGAAGGTGCAGACTCTTCAGACTGAAGCAACTAACCTTTCTGCACAGCTTACCATGCTTCAGAGAGACACTACAGATTTGACTGCACAGAATAAGGAGCTCAAACTGCGCTTACAGGCTTTTGAGCAAGAAGCACAGCTTAGAGAAGATCTCAATGAGGCATTGAAGAAAGAACTGCAGCGCCTTAGGGTACAAAGTGCTTGCTGGGGTGCTATGACTGGTGGTAACCCTTCTTTTGGTGGGATATTCAACCAGTTGGCTTCCCAGTTAGCCATGCAACAGTTGTCTAATTCTGTGCCCCATCAGCACCAGACACAACACCAGCCACAGGTTGGCATGCCTCCTCCCCCCTCTGGACAGAAGCACCCTAAGTTCATGGACTTCAATCAGCAGAAGTAG 1161 0.5444 MMHFFTIGYTQLPSTFCSLKSIFFFASTCSSANSHNHLKTESQPSLLLLLSLSLCFSMDPKFIGKPLAMVDLDRDRMSERGSHHRRSHSDTSFRFAANFDELLLFDPSDLDISGLPSPLPLPSQGAGGVVPMSVVSEESGGRPRRSGASAGGHLRSLSVDSDFFDGLGSGVGGDERGAGNGGGERHSNSMEGSSTTSFEADSATMMDGMKKATAPDKLAELALTDPKRAKRMLANRQSAARSKERKIRYTSELEKKVQTLQTEATNLSAQLTMLQRDTTDLTAQNKELKLRLQAFEQEAQLREDLNEALKKELQRLRVQSACWGAMTGGNPSFGGIFNQLASQLAMQQLSNSVPHQHQTQHQPQVGMPPPPSGQKHPKFMDFNQQK 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01503 386 Gene3D - 226 280 - -
Gma16g01503 386 SMART brlzneu 223 287 IPR004827 GO:0003700|GO:0006355
Gma16g01503 386 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 225 288 IPR004827 GO:0003700|GO:0006355
Gma16g01503 386 MobiDBLite consensus disorder prediction 134 154 - -
Gma16g01503 386 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 63 383 - -
Gma16g01503 386 CDD bZIP_plant_RF2 228 277 IPR044759 GO:0003700|GO:0006355
Gma16g01503 386 Coils Coil 250 319 - -
Gma16g01503 386 MobiDBLite consensus disorder prediction 348 363 - -
Gma16g01503 386 Pfam bZIP transcription factor 227 285 IPR004827 GO:0003700|GO:0006355
Gma16g01503 386 SUPERFAMILY Leucine zipper domain 227 279 IPR046347 GO:0003700|GO:0006355
Gma16g01503 386 MobiDBLite consensus disorder prediction 166 197 - -
Gma16g01503 386 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 63 383 - -
Gma16g01503 386 MobiDBLite consensus disorder prediction 348 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01503 Gma-Chr16 34458805 34463374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01503 79 385 bZIP Transcription Factor Family AT1G43700 48.358 1.29e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma16g01503 bZIP_1 2.1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01503 K20557 - gmx:100101886 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01503 16 34458805 34463374 Gma02g00746 02 7256942 7262624 GST