Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01501 ATGAATAAATCGATTTCAATCTTTGCAGTATCGAACATCTCTGCACACTTCATTCCCAAATCCCACTCGTTTCTCTGTTGTTTCTGCACTGTTTTGAGGAGGTTGAAGGGGAAAAGTGGGTATCAAAGTTGGCATAGCAGAAGTGCAATCAGCTCTAGTTTCATATCCTTAATATATAGTGGTTTCTGTGCTTGCAACAGGAACATGGATGCACAAGCCAAGAAAAAAGCATTGTTTCGTGCTAAATTGAATGCCCAGAAGAAGGAAAAACGCATAGAATCTCCCCTTGTAAGGTATAATGAATTTGATCAACCTGTTTGCCGGGTTTGTGATGTTGTTCTAAAGTCTGAGTCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGGCAATAAGTAATCTGAAAGCGAATGCAGCTGGATTAACTCAGCATAACAATGCAAAGCCTGTTGCTGATTCCAGCTTTTCCAAGGCTAAACCAGAACATTCTTTGGACTCACAATTCAAACCGCCAGAAGCTTCACAACTAGTTTCTAAACCTCAATCATCATCGGTGCTTCCACCAGGATTTTTTGATGACAGCGATTCAGGAAAAACAAGATCTGAACATTTAGTGGACTCTGATTTAGGTAGAAAAGCTGGGGTTTCTGCTAAAAGTCAGGTGTCAAACTTGGAGAAGGATAAAGGTCAATTTGATGACAATAATGTTGCAAAGTCAAATGTTAGCCAAGCCACAACGGATAGTAGGCAGACATCAGTCAAGACTACTGATACAGAGATCCAGCAAGTAAAAGGGATTCTGCCTGAAGGATTTTTTGACAATAAGGAAGCCGATTTGCGTGCTCGTGGCATAAAGCTTGTTAAGCCAGATGTCAAAGACGAGTACAAGGAATTTGAGAAGTTGATTCAAGAAGACTTGCAGGAGGTGGATGACCGGTTGGAAGAAGAAGAGATTGATGCGGCCGAAATGATAGAAGAGGAGGAAGTTGTAGAGCAAAAGATGCTTAGCGAGAAAGTGGAAATGTTGAAGAAGAGGAGATTGGAGCTAAAAGCTGCTAATGCTGCAAAGCGTAGTAAATCATCTGAGATTGTAGCCAAGGAGTCTAGACAAGAAGAGTCATCCAGTGATGATGAAAGTGAAGAGAATTTTGCCGTGGACTGGAGAGCACAACACTTGTGA 1185 0.4152 MNKSISIFAVSNISAHFIPKSHSFLCCFCTVLRRLKGKSGYQSWHSRSAISSSFISLIYSGFCACNRNMDAQAKKKALFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCDVVLKSESLWDAHQVSRKHREAISNLKANAAGLTQHNNAKPVADSSFSKAKPEHSLDSQFKPPEASQLVSKPQSSSVLPPGFFDDSDSGKTRSEHLVDSDLGRKAGVSAKSQVSNLEKDKGQFDDNNVAKSNVSQATTDSRQTSVKTTDTEIQQVKGILPEGFFDNKEADLRARGIKLVKPDVKDEYKEFEKLIQEDLQEVDDRLEEEEIDAAEMIEEEEVVEQKMLSEKVEMLKKRRLELKAANAAKRSKSSEIVAKESRQEESSSDDESEENFAVDWRAQHL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01501 394 Coils Coil 301 335 - -
Gma16g01501 394 MobiDBLite consensus disorder prediction 356 375 - -
Gma16g01501 394 MobiDBLite consensus disorder prediction 170 191 - -
Gma16g01501 394 PANTHER UNCHARACTERIZED 69 394 IPR040050 GO:0003676|GO:0005681|GO:0008270
Gma16g01501 394 Gene3D Classic Zinc Finger 100 138 - -
Gma16g01501 394 SUPERFAMILY beta-beta-alpha zinc fingers 99 139 IPR036236 -
Gma16g01501 394 MobiDBLite consensus disorder prediction 356 394 - -
Gma16g01501 394 Pfam Zinc-finger of C2H2 type 107 129 - -
Gma16g01501 394 MobiDBLite consensus disorder prediction 141 258 - -
Gma16g01501 394 MobiDBLite consensus disorder prediction 197 211 - -
Gma16g01501 394 MobiDBLite consensus disorder prediction 236 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01501 Gma-Chr16 34445382 34451266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01501 69 394 C2H2 Transcription Factor Family AT3G02860 53.939 2.82e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01501 K13104 - gmx:100808515 676.011