Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01496 ATGGAAGGCAAGTTGTCAAAGAGAGGTATGCTTCAAGGTAGGGGTCGTTTTGGTGGTTCTGATTTGCCTAGATCAATGCGAGTTCGTCGAAAAGAGAAGCATCCTCATTCCATGAACCAACAACATATTCATCATTGCCAAAGGTCTTTAGTGCACTCCTCAATTCATGATGGTTTGCCTCTTACAATGGGATCCTTCCAGAAATGTGATCATCAGATTTTGTCAATGACTGAGTTTAATCAAAGGGGTATACACAAGACCTCACCAAGTGATGCAAGTTTAGTCGAAGAATGTGTTGATGGTCATCATGAAGCGGGTAAAGGGAAAAAAAGTACTCCTTGGCAGCAGGTGAAATGGACTGATAAGATGGTAAAACTTCTAATAATGGTCATGTCTTACATAGGTGAGGATGCAACTTTTGACAACAGTAGCAAAAGAAGAAAATTTACAGTCCTACAAAATAAAGGGAAATGGAAATCCATTTCTAAGGTCATGGCTGAAAGAGGTTACCATGTTTCACCTCAACAATGTGAGGATAAATTCAATGACCTTAGTAAAAGCTACAAAAAGCTTAATGTTATGCTTGGGAGGGGAACTTCCTGTCGGGTTGTTGAAAATCCTTCTTTGTTGGATTTGATTGATTATCTTTCCGAGAAAGAAAAGGACCATGTTCGAAAAATATTGAGCTCCAAACATCTGTTTTATGAAGAGATGTGTTCTTACCATAATGGTAATAGATTGCATTTACCCCATGATCCAACATTGCAACAATCACTGCAGGCGGCTCTTCAAAATAGAGATGACCATGATAGTGATGATATCAGAAGATCCCATCACTATGATTATGACAAAGATGATATAGATATGGAAAGTAGTGATCAGGATGACTTTGAAGAGAATTATGCTTCCCTTGCAAATAGTAGAGGAGTCTATGGGGCAACAAGGCAACCTTTGAAGAGATTAAAAACTGGGCAAGGACAAGTAGATGTTGCTACTTTTGGGAGTGCTTTAAACAGTAGAGAGTACAACAAAAGTTCATATTCTCCTGTAGTTCAATCTGATGGGAATCAAGATTTCCTTCCAAAAATGAGAGCAGCTTGGTTACAAAAGCAATCGGTTGAATCTCGTTCACTTCAGTTAGAAGAGCAGAAGCTACAAATTCAAGACGAGATGTTGGAGCTGAAGAAACAAAGATTCAAGTGGCAGAAGTTTAGTAGGAAAAAAGATCTTGAGTTAGAAAAGTTGAAGCTAGAGAATGAAAGAATGAAGATTGAGAATGAACGTATTGCTTTAAAATTGAAGCGCCAGGAAATTAGCGCCAACTTTAACTAG 1332 0.3836 MEGKLSKRGMLQGRGRFGGSDLPRSMRVRRKEKHPHSMNQQHIHHCQRSLVHSSIHDGLPLTMGSFQKCDHQILSMTEFNQRGIHKTSPSDASLVEECVDGHHEAGKGKKSTPWQQVKWTDKMVKLLIMVMSYIGEDATFDNSSKRRKFTVLQNKGKWKSISKVMAERGYHVSPQQCEDKFNDLSKSYKKLNVMLGRGTSCRVVENPSLLDLIDYLSEKEKDHVRKILSSKHLFYEEMCSYHNGNRLHLPHDPTLQQSLQAALQNRDDHDSDDIRRSHHYDYDKDDIDMESSDQDDFEENYASLANSRGVYGATRQPLKRLKTGQGQVDVATFGSALNSREYNKSSYSPVVQSDGNQDFLPKMRAAWLQKQSVESRSLQLEEQKLQIQDEMLELKKQRFKWQKFSRKKDLELEKLKLENERMKIENERIALKLKRQEISANFN 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01496 443 Coils Coil 370 397 - -
Gma16g01496 443 MobiDBLite consensus disorder prediction 1 40 - -
Gma16g01496 443 PANTHER F16F4.11 PROTEIN-RELATED 1 442 - -
Gma16g01496 443 MobiDBLite consensus disorder prediction 265 286 - -
Gma16g01496 443 MobiDBLite consensus disorder prediction 263 294 - -
Gma16g01496 443 Pfam Myb/SANT-like DNA-binding domain 117 241 IPR044822 -
Gma16g01496 443 PANTHER F16F4.11 PROTEIN 1 442 - -
Gma16g01496 443 Coils Coil 405 437 - -
Gma16g01496 443 Gene3D - 119 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01496 Gma-Chr16 34390189 34391520 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma16g01496 Myb_DNA-bind_4 9e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01496 - - gmx:100805861 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01496 16 34390189 34391520 Gma16g01496 16 34390189 34391520 ECH
Gma16g01496 16 34390189 34391520 Gma02g00739 02 7189008 7190041 GST
Gma16g01496 16 34390189 34391520 Gma10g02150 10 49025757 49028005 PCT
Gma16g01496 16 34390189 34391520 Gma20g01564 20 42678482 42681192 PCT
Gma10g02150 10 49025757 49028005 Gma16g01496 16 34390189 34391520 PCT
Gma20g01564 20 42678482 42681192 Gma16g01496 16 34390189 34391520 PCT