Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01482 ATGGCTGCTTCAACAATGGCTCTCTCTTCATCATCATTGGCTGGCCAAGCTATCAAGCTTGCCCCCTCCACCCCTCAGCTTGGTGTTGGAAGGGTTAGCATGAGGAAAACAGCCTCCAAGACTGTTTCTTCTGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCTGGTGAGCCCCCATCCTACCTCACTGGTGAATTCCCAGGTGACTATGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACCTTTGCCAAGAACCGTGAACTTGAAGTCATCCACTCCAGATGGGCCATGTTGGGAGCCCTGGGCTGTGTTTTCCCCGAACTCTTGGCCCGCAACGGTGTCAAGTTCGGTGAAGCCGTGTGGTTCAAGGCCGGGTCTCAGATATTCAgcaattgtgacaggaaagggacctttggaaaatcttgctga 453 0.4989 MAASTMALSSSSLAGQAIKLAPSTPQLGVGRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSNCDRKGTFGKSC 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01482 150 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 140 IPR001344 GO:0009765|GO:0016020
Gma16g01482 150 Pfam Chlorophyll A-B binding protein 64 135 IPR022796 -
Gma16g01482 150 Gene3D Chlorophyll a/b binding protein domain 55 144 - -
Gma16g01482 150 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 1 140 - -
Gma16g01482 150 SUPERFAMILY Chlorophyll a-b binding protein 47 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01482 Gma-Chr16 34085468 34086195 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01482 1 139 Chloroplast and Mitochondria Gene Families AT2G34430 82.857 5.36e-82 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01482 K08912 - gmx:547819 280.026