Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01480 ATGGCTGCTTCAACAATGGCTCTCTCTTCATCATCATTGGCTGGCCAAGCTATCAAGCTTGCCCCCTCCACCCCTCAGCTTGGTGTTGGAAGGGTTAGCATGAGAAAAACAGCCTCCAAGACTGTTACCTCAGGAAGCCCATGGTACGGCCCAGATCGTGTCAAGTACTTGGGCCCATTCTCTGGTGAGCCCCCATCCTACCTCACTGGTGAATTCCCAGGTGACTATGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACCTTTGCCAAAAACCGTGAACTGGAAGTCATCCACTCCAGATGGGCCATGTTGGGAGCCTTGGGCTGTGTTTTCCCTGAACTCTTGTCCCGCAACGGAGTCAAGTTTGGTGAGGCCGTGTGGTTCAAGGCCGGGTCTCAGATATTCAGTGAGGGCGGGCTTgactacttgggcaacccaagcctgatccatgcacaaagcattcttgccatctgggccacccaagttatcttgatgggtgcagttgagggttaccgtattgctggtgggcctcttggtgaggtgactgatccaatctatccaggtggcagctttgacccattgggtcttgctgatgacccagaggcttttgctgagctgaaggtgaaggagctcaagaatgTTCAACCCATTATAGTCATTGTTGTCACCGAAAAACAATACCACCTACAACTATTAATGGAAGAGAAGACCAAGAAAGACTTCAAAGCAGACAAGAAAACATCTTGCAAGCATGTGATAGGCCTCCAAACATTTCAACCACTGTTCTGA 795 0.3635 MAASTMALSSSSLAGQAIKLAPSTPQLGVGRVSMRKTASKTVTSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNVQPIIVIVVTEKQYHLQLLMEEKTKKDFKADKKTSCKHVIGLQTFQPLF 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01480 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 1 217 - -
Gma16g01480 264 Gene3D Chlorophyll a/b binding protein domain 55 217 - -
Gma16g01480 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 217 IPR001344 GO:0009765|GO:0016020
Gma16g01480 264 SUPERFAMILY Chlorophyll a-b binding protein 47 215 - -
Gma16g01480 264 Pfam Chlorophyll A-B binding protein 64 215 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01480 Gma-Chr16 34069347 34071605 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01480 1 215 Chloroplast and Mitochondria Gene Families AT2G34430 84.793 8.45e-134 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01480 K08912 - gmx:100799813 434.876